Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq271823 152 2e-34 seq129854 152 2e-34 seq106185 152 2e-34 seq99726 152 2e-34 seq72323 152 2e-34 seq2913 152 2e-34 seq2552 145 3e-32 seq65 116 2e-23 >seq271823 Length=237 Score = 152 bits (168), Expect = 2e-34 Identities = 104/117 (89%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 156 TGGTACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTG 97 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| ||||||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 96 GAGGCCCGCAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 40 >seq129854 Length=347 Score = 152 bits (168), Expect = 2e-34 Identities = 104/117 (89%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 118 TGGTACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTG 59 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| ||||||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 58 GAGGCCCGCAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 2 >seq106185 Length=391 Score = 152 bits (168), Expect = 2e-34 Identities = 104/117 (89%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 118 TGGTACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTG 59 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| ||||||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 58 GAGGCCCGCAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 2 >seq99726 Length=399 Score = 152 bits (168), Expect = 2e-34 Identities = 104/117 (89%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 170 TGGTACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTG 111 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| ||||||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 110 GAGGCCCGCAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 54 >seq72323 Length=423 Score = 152 bits (168), Expect = 2e-34 Identities = 104/117 (89%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 268 TGGTACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTG 327 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| ||||||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 328 GAGGCCCGCAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 384 >seq2913 Length=17693 Score = 152 bits (168), Expect = 2e-34 Identities = 104/117 (89%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 6474 TGGTACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTG 6415 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| ||||||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 6414 GAGGCCCGCAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 6358 Score = 145 bits (160), Expect = 3e-32 Identities = 128/160 (80%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || |||| |||||| | | ||||| ||||||| Sbjct 8402 GAGTCGGGTTGTTTGGGAATGCAGCCCAAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 8343 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 8342 ACCGGCACGAGACCGATAGCGAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 8283 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| ||||| ||| || || Sbjct 8282 AGAGAGTTCAACAGGGCGTGAAACCGTTGAGAGGTAAACG 8243 >seq2552 Length=38409 Score = 145 bits (160), Expect = 3e-32 Identities = 100/113 (88%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 ||||||||||||||||||||||||||| ||||||||||| | |||||||| |||||||| Sbjct 20971 ACCCGAAAGATGGTGAACTATGCCTGAGCAGGGTGAAGCCGGGGGAAACTCCGGTGGAGG 21030 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | || |||||| ||| ||||||||||| |||| | | |||||||||||||||| Sbjct 21031 CCCGAAGCGGTCCTGACGTGCAAATCGGTCGTAAGACTTGGGTATAGGGGCGA 21083 Score = 141 bits (156), Expect = 4e-31 Identities = 133/167 (80%), Gaps = 3/167 (2%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAAT-GGGAGGTAAATTTCTTCTAAAGCTAAA 98 |||||| |||||||||||||||||| | || | ||| |||||| | | ||||| |||||| Sbjct 19993 GAGTCGGGTTGTTTGGGAATGCAGCCCAAAGTTGGGTGGTAAACTCCATCTAAGGCTAAA 20052 Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA--AGCACTTTG 156 || |||| ||||||||||||| ||||||| |||| ||||| ||||| || |||||| Sbjct 20053 TACTGGCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAACCAGAACTTTG 20112 Query 157 GAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTG 203 | |||||||| || || |||||||| ||| | ||| || ||| || Sbjct 20113 AAGAGAGAGTTCAAGAGAACGTGAAACCGTTAAGAGGAAAACGCATG 20159 >seq65 Length=3509357 Score = 116 bits (128), Expect = 2e-23 Identities = 105/131 (80%), Gaps = 1/131 (1%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCC-TGAATAGGGTGAAGCCAG 612 |||||| | | ||| ||||||||||||||||||| |||| || |||| |||||||| Sbjct 2006227 AGAGCACACGCGATGGTACCCGAAAGATGGTGAACTTTGCCCTGGGCAGGGCGAAGCCAG 2006168 Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672 ||||||||||||||||||| ||||| ||| ||| | ||||||| | || || | |||| Sbjct 2006167 AGGAAACTCTGGTGGAGGCCCGCAGTGGTCCTGACATGCAAATGGGTCTTCCGACCTGGG 2006108 Query 673 TATAGGGGCGA 683 | |||||| || Sbjct 2006107 TGTAGGGGTGA 2006097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2073918538900