Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq8829 95.1 1e-17 >seq8829 Length=1066 Score = 95.1 bits (104), Expect = 1e-17 Identities = 133/181 (73%), Gaps = 8/181 (4%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| | |||||| ||||||||| || |||||||||||| |||| Sbjct 524 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCCTGCGAAAAGCTGCGGG 465 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCG--ATATATTGG 124 || ||||| | | | |||||||| |||| ||||||||||| |||||| ||| || Sbjct 464 GAGCTGGCAAACAAGCTTTGATCCGCAGATGTCCGAATGGGGAAACCCGGCCCGTATGGG 405 Query 125 AGAT--ATATCATAACGC-TAGGC--GTTAGGCGAACGTGGGGAACTGAAACATCTAAGT 179 || | | || | ||||| | | ||||||| | |||||||||||||||||| Sbjct 404 TCATCCCTTGCTGAATACATAGGCAAGGGAAGCGAACGCAGCGAACTGAAACATCTAAGT 345 Query 180 A 180 | Sbjct 344 A 344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475490430358