Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq71567 109 3e-22 seq31957 109 3e-22 seq24813 109 3e-22 seq2552 109 3e-22 seq2913 107 9e-22 >seq71567 Length=425 Score = 109 bits (120), Expect = 3e-22 Identities = 88/106 (83%), Gaps = 4/106 (4%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||| |||| ||||||| ||| ||||||||||||| || Sbjct 84 GGAAAAGAAACTAACCAGGATTCCCCTAGTAGCGGCGAGCGAAGAGGGAAGAGCCCATCG 143 Query 61 CCGAATCCCC----GCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||| ||||| ||| | ||||||||||||||| Sbjct 144 CCGAATCCCCTGTTTCCCCGATAACGGGTGGGGGACATGTGGCGTA 189 >seq31957 Length=688 Score = 109 bits (120), Expect = 3e-22 Identities = 88/106 (83%), Gaps = 4/106 (4%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||| |||| ||||||| ||| ||||||||||||| || Sbjct 339 GGAAAAGAAACTAACCAGGATTCCCCTAGTAGCGGCGAGCGAAGAGGGAAGAGCCCATCG 280 Query 61 CCGAATCCCC----GCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||| ||||| ||| | ||||||||||||||| Sbjct 279 CCGAATCCCCTGTTTCCCCGATAACGGGTGGGGGACATGTGGCGTA 234 >seq24813 Length=1799 Score = 109 bits (120), Expect = 3e-22 Identities = 88/106 (83%), Gaps = 4/106 (4%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||| |||| ||||||| ||| ||||||||||||| || Sbjct 116 GGAAAAGAAACTAACCAGGATTCCCCTAGTAGCGGCGAGCGAAGAGGGAAGAGCCCATCG 57 Query 61 CCGAATCCCC----GCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||| ||||| ||| | ||||||||||||||| Sbjct 56 CCGAATCCCCTGTTTCCCCGATAACGGGTGGGGGACATGTGGCGTA 11 >seq2552 Length=38409 Score = 109 bits (120), Expect = 3e-22 Identities = 88/106 (83%), Gaps = 4/106 (4%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||| |||| ||||||| ||| ||||||||||||| || Sbjct 19757 GGAAAAGAAACTAACCAGGATTCCCCTAGTAGCGGCGAGCGAAGAGGGAAGAGCCCATCG 19816 Query 61 CCGAATCCCC----GCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||| ||||| ||| | ||||||||||||||| Sbjct 19817 CCGAATCCCCTGTTTCCCCGATAACGGGTGGGGGACATGTGGCGTA 19862 >seq2913 Length=17693 Score = 107 bits (118), Expect = 9e-22 Identities = 87/103 (84%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| |||| ||||||| ||| |||||||||||||||| Sbjct 8622 GGAAAAGAAACTAACAAGGATTCCCCTAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGCG 8563 Query 61 CCGAATCCCCGCCCCGCGGTGGG-GCGCGGGACATGTGGCGTA 102 |||||||||| || | ||| ||| |||| |||||||||| Sbjct 8562 CCGAATCCCCCGTCCTTGACGGGCGCG-GGGAAATGTGGCGTA 8521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 229787601120