Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq179136 244 2e-62 seq99894 239 7e-61 seq102657 237 2e-60 seq266 183 5e-44 seq2552 172 9e-41 seq176492 170 3e-40 seq86 170 3e-40 seq265336 163 5e-38 seq241 159 6e-37 seq654 143 4e-32 seq116 136 6e-30 seq37851 118 2e-24 seq367 105 1e-20 seq201423 100 5e-19 seq93177 100 5e-19 seq91451 89.7 8e-16 seq50 87.8 3e-15 seq164367 78.8 1e-12 >seq179136 Length=286 Score = 244 bits (270), Expect = 2e-62 Identities = 203/245 (83%), Gaps = 5/245 (2%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| || Sbjct 7 CATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCC 65 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGA 136 | || | |||||| | |||| | |||||||||||||| | | || |||| | | Sbjct 66 ATCT-CGTGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGACGCCGACCACGGGGGG 124 Query 137 TGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | | |||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 125 CCGCGTAACTATTTAGCATGAGGGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCG 184 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct 185 CTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCGAGAAAGAGCTATCAAT 244 Query 254 CTGTC 258 ||||| Sbjct 245 CTGTC 249 >seq99894 Length=399 Score = 239 bits (264), Expect = 7e-61 Identities = 202/245 (82%), Gaps = 5/245 (2%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| || Sbjct 7 CATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCC 65 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGA 136 | || | |||||| | |||| | |||||||||||||| | | || |||| | | Sbjct 66 ATCT-CGTGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGACGCCGACCACGGGGGG 124 Query 137 TGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | | |||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 125 CCGCGTAACTATTTAGCATGAGGGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCG 184 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 ||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||| Sbjct 185 CTCCACCAACTAAGAGCGGCCATGCACCACCACCCACAGAATCGAGAAAGAGCTATCAAT 244 Query 254 CTGTC 258 ||||| Sbjct 245 CTGTC 249 >seq102657 Length=397 Score = 237 bits (262), Expect = 2e-60 Identities = 203/246 (83%), Gaps = 6/246 (2%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| || Sbjct 117 CATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCC 175 Query 77 AACTTCCATTGGCTGGAAGCCAATA-GTCCCTCTAAGAAGCCAGCCACCAACCATAGTCG 135 | || | |||||| | |||| | |||||||||||||| | | || |||| | | Sbjct 176 ATCT-CGTGTGGCTGAACGCCACTTTGTCCCTCTAAGAAGTTGGACGCCGACCACGGGGG 234 Query 136 ATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATC 192 | | |||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 235 GCCGCGTAACTATTTAGCATGAGGGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATC 294 Query 193 ACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAA 252 |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct 295 GCTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCGAGAAAGAGCTATCAA 354 Query 253 TCTGTC 258 |||||| Sbjct 355 TCTGTC 360 >seq266 Length=1123263 Score = 183 bits (202), Expect = 5e-44 Identities = 163/201 (81%), Gaps = 5/201 (2%) Strand=Plus/Minus Query 24 GCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 83 |||||||||| |||| | ||||||||||||||||||||||||||||||| || | || | Sbjct 523273 GCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCCATCT-CG 523216 Query 84 ATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATGGGG-- 141 |||||| | |||| | |||||||||||||| | | || |||| | | | | Sbjct 523215 TGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGACGCCGACCACGGGGGGCCGCGTA 523156 Query 142 -CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACC 200 |||||||||| | |||||||||||||||||||||||||||||||||| ||||||| Sbjct 523155 ACTATTTAGCATGAGGGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACC 523096 Query 201 AACTAAGAACGGCCATGCACC 221 ||||||||||||||||||||| Sbjct 523095 AACTAAGAACGGCCATGCACC 523075 >seq2552 Length=38409 Score = 172 bits (190), Expect = 9e-41 Identities = 196/255 (77%), Gaps = 15/255 (6%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||| |||| | | ||||| |||| | ||||||||||||||||||||||||||||||| | Sbjct 18320 GTCATTGTAACTCACGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 18262 Query 75 CAAACTTCCATTGGCTGGAAGCCAA------TAGTCCCTCTAAGAAGCCAGCCACCAACC 128 | | || || |||| | ||| || ||||||||||||| ||| || | | Sbjct 18261 CCATCTCGCAC-GGCTT-ACGCCTCGCCGCGTA-TCCCTCTAAGAAGTTAGCTACGACCA 18205 Query 129 A--TAGTCGATGGGG--CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCA 184 | |||| | | | ||||||| || | || ||||| |||||||||||| | ||| Sbjct 18204 AAATAGTGGCCGCAGAACTATTTAACACGCCGGGGACTCGTCCGTTATCGGAATCAGCCA 18145 Query 185 GACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCA-CCCATAGAATCAAGAAAG 243 |||| ||| |||||| ||||| ||||||||||||||||||| |||| ||||| |||||| Sbjct 18144 GACAGATCGCTCCACGAACTACGAACGGCCATGCACCACCACCCCACTGAATCGAGAAAG 18085 Query 244 AGCTATCAATCTGTC 258 ||||||||||||||| Sbjct 18084 AGCTATCAATCTGTC 18070 >seq176492 Length=288 Score = 170 bits (188), Expect = 3e-40 Identities = 108/117 (92%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||||| | |||||||||||||||||||||||||||||||||| |||||||| Sbjct 243 CTATTTAGCATGAGGGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 184 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct 183 ACTAAGAACGGCCATGCACCACCACCCACAGAATCGAGAAAGAGCTATCAATCTGTC 127 >seq86 Length=2952897 Score = 170 bits (188), Expect = 3e-40 Identities = 189/249 (76%), Gaps = 6/249 (2%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||| |||| | | ||||| |||| | ||||||||||||||||||||||||||||||| | Sbjct 21637 GTCATTGTAACTCACGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 21579 Query 75 CAAACTTCCATTGG---CTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATA 131 | | || || | || ||| ||||||||||||| ||| || | | | | Sbjct 21578 CCATCTCGCACGGCTTACTCCTCGCCGCGTATCCCTCTAAGAAGTTAGCTACGACCAAGA 21519 Query 132 GTCGATGGGG--CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAA 189 | | | ||||||| || | || ||||| |||||| ||||| | ||||||| Sbjct 21518 AGGGCCGCAGAACTATTTAACACGCCGGGGACTCGTCCGTTATTGGAATCAGCCAGACAG 21459 Query 190 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTAT 249 ||| |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 21458 ATCGCTCCACGAACTATGAACGGCCATGCACCACCACCCACTGAATCAAGAAAGAGCTAT 21399 Query 250 CAATCTGTC 258 ||||||||| Sbjct 21398 CAATCTGTC 21390 >seq265336 Length=239 Score = 163 bits (180), Expect = 5e-38 Identities = 155/195 (79%), Gaps = 5/195 (3%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| || Sbjct 193 CATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCC 135 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGA 136 | || | |||||| | |||| | |||||||||||||| | | || |||| | | Sbjct 134 ATCT-CGTGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGACGCCGACCACGGGGGG 76 Query 137 TGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | | |||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 75 CCGCGTAACTATTTAGCATGAGGGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCG 16 Query 194 CTCCACCAACTAAGA 208 ||||||||||||||| Sbjct 15 CTCCACCAACTAAGA 1 >seq241 Length=1227248 Score = 159 bits (176), Expect = 6e-37 Identities = 173/228 (76%), Gaps = 20/228 (9%) Strand=Plus/Minus Query 42 ACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCAT-TGGCTGGAAGCCAAT 100 |||||||| ||||||||||||||||||||| || | || ||| || ||| | ||| | Sbjct 320309 ACATCTAAAGGCATCACAGACCTGTTATTGT-TCCATCT--CATGTGACTGAACACCACT 320253 Query 101 AGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATGGGG----------CTATTTAGC 150 ||||| ||||||| | | | || |||| ||||||||| Sbjct 320252 TATCCCTATAAGAAGTTGGTGGT------TGGGCGGGGGGGGGCTGTGTAACTATTTAGC 320199 Query 151 AGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAAC 210 | | | ||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct 320198 ATGAGAGAGTCTCGTTCATTACCGGAATTAACCAGACAAATCACTCCACCAACTAAGAAT 320139 Query 211 GGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||| ||||||||||||| |||||| ||||||||||||| ||||||| Sbjct 320138 GGCCAAGCACCACCACCCACAGAATCGAGAAAGAGCTATCGATCTGTC 320091 >seq654 Length=330003 Score = 143 bits (158), Expect = 4e-32 Identities = 184/249 (74%), Gaps = 15/249 (6%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||| |||| | ||| ||||||| |||||||||||||||||||||||||||||| | Sbjct 313066 GTCATTGTAACTCGCATGCGGCCT----CATCTAAGGGCATCACAGACCTGTTATTGC-T 313120 Query 75 CAAACTTC-----CATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCA 129 | ||| | || ||| || || |||||||||||| | ||| | Sbjct 313121 CCTTCTTGTGCGGCTTTCGCTTACCGCTTAT---CCCTCTAAGAAGTT-GAGACCGCGGA 313176 Query 130 TAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAA 189 | | | || |||||||| | | ||| || ||||||||| |||| |||||||||| Sbjct 313177 TGGCC-ATATAACTATTTAGTACGAGGGGGTGTCATTCGTTATCAGAATCAACCAGACAA 313235 Query 190 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTAT 249 ||| |||||||||| | ||||||||||||||||||||||| |||||| |||||||||| Sbjct 313236 ATCGCTCCACCAACGAGGAACGGCCATGCACCACCACCCACAGAATCGAGAAAGAGCTCC 313295 Query 250 CAATCTGTC 258 || | |||| Sbjct 313296 CAGTATGTC 313304 >seq116 Length=2379552 Score = 136 bits (150), Expect = 6e-30 Identities = 189/260 (73%), Gaps = 26/260 (10%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC---- 72 || ||| | |||| ||| || | | ||||||||||||||||||||||| ||| ||| Sbjct 958896 CATTGTGGTGCGCATGCAGCTCCGGACATCTAAGGGCATCACAGACCTTTTACTGCTCCA 958955 Query 73 -CTCAAAC---------TTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC-CAGC- 120 |||| || ||||||| || | || || ||| |||| ||| ||| Sbjct 958956 TCTCATACGGCCATTCTTTCCATTCTCTCGCCGCTTAT---CCCCCTAAAAAGTTCAGGA 959012 Query 121 CACCAACCATAGTCG---ATGGGGCTATTTAGCAGGTTAAGGT--CTCGTTCGTTATCGG 175 | | ||| || | | | |||||||||| | |||| ||||||||||||||| Sbjct 959013 CGCTGACCGCAGGTGGCCACGTAACTATTTAGCACG--AAGGAGCCTCGTTCGTTATCGG 959070 Query 176 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235 ||||||||||||||||| ||||||| ||||||| | |||||||||||||||||| |||| Sbjct 959071 AATTAACCAGACAAATCGCTCCACCCACTAAGAGCAGCCATGCACCACCACCCACGGAAT 959130 Query 236 CAAGAAAGAGCTATCAATCT 255 |||||| ||||| | |||| Sbjct 959131 CAAGAATGAGCTCTACATCT 959150 >seq37851 Length=624 Score = 118 bits (130), Expect = 2e-24 Identities = 70/73 (96%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 186 ACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAG 245 ||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct 1 ACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCGAGAAAGAG 60 Query 246 CTATCAATCTGTC 258 ||||||||||||| Sbjct 61 CTATCAATCTGTC 73 >seq367 Length=757865 Score = 105 bits (116), Expect = 1e-20 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 161 CTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCAC 220 ||| |||||||||||||||||||||||||||| ||||||||||||||||| || |||||| Sbjct 339872 CTCATTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACAGCAATGCAC 339813 Query 221 CACCACCCATAGA 233 ||||| ||| ||| Sbjct 339812 CACCAGCCACAGA 339800 >seq201423 Length=269 Score = 100 bits (110), Expect = 5e-19 Identities = 83/99 (84%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || ||| |||||||||| |||| | |||||||||||||||||||||||||||||| ||| Sbjct 117 CATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCC 175 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 | | || |||||| | |||| | |||||||||||||| Sbjct 176 ATC-TCGTGTGGCTGAACGCCACTTGTCCCTCTAAGAAG 213 >seq93177 Length=399 Score = 100 bits (110), Expect = 5e-19 Identities = 83/99 (84%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || ||| |||||||||| |||| | |||||||||||||||||||||||||||||| ||| Sbjct 247 CATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCC 305 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 | | || |||||| | |||| | |||||||||||||| Sbjct 306 ATC-TCGTGTGGCTGAACGCCACTTGTCCCTCTAAGAAG 343 >seq91451 Length=399 Score = 89.7 bits (98), Expect = 8e-16 Identities = 52/54 (96%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 205 AAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct 1 AAGAACGGCCATGCACCACCACCCACAGAATCGAGAAAGAGCTATCAATCTGTC 54 >seq50 Length=3997006 Score = 87.8 bits (96), Expect = 3e-15 Identities = 79/100 (79%), Gaps = 12/100 (12%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||| ||||||||||||||| | |||||||| ||| ||||| ||||||||| Sbjct 1779820 GTCTCCTTCGTTATCGGAATTGA---------TCACTCCATCAATTAAGAGCGGCCATGC 1779870 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||| | ||| || ||||||||||||||||||||| Sbjct 1779871 ACCACC---CTTAGTATTGAGAAAGAGCTATCAATCTGTC 1779907 >seq164367 Length=300 Score = 78.8 bits (86), Expect = 1e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| Sbjct 83 CATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794611524558