Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq164367 77.0 2e-12 seq149366 77.0 2e-12 seq93177 77.0 2e-12 seq92278 77.0 2e-12 >seq164367 Length=300 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || |||||||| ||||||||||| ||||||||||||||||||| Sbjct 283 CTCACTAAACCATCCGAT-CGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 226 Query 109 TAATACAACGCAAGCT 124 |||| ||| || |||| Sbjct 225 TAAT-CAATGCGAGCT 211 >seq149366 Length=318 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || |||||||| ||||||||||| ||||||||||||||||||| Sbjct 153 CTCACTAAACCATCCGAT-CGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 96 Query 109 TAATACAACGCAAGCT 124 |||| ||| || |||| Sbjct 95 TAAT-CAATGCGAGCT 81 >seq93177 Length=399 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || |||||||| ||||||||||| ||||||||||||||||||| Sbjct 47 CTCACTAAACCATCCGAT-CGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 104 Query 109 TAATACAACGCAAGCT 124 |||| ||| || |||| Sbjct 105 TAAT-CAATGCGAGCT 119 >seq92278 Length=399 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || |||||||| ||||||||||| ||||||||||||||||||| Sbjct 218 CTCACTAAACCATCCGAT-CGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 275 Query 109 TAATACAACGCAAGCT 124 |||| ||| || |||| Sbjct 276 TAAT-CAATGCGAGCT 290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300000479240