Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq93177 185 2e-44 seq164367 176 9e-42 seq201423 125 1e-26 seq102657 122 2e-25 seq92278 111 3e-22 seq149366 109 1e-21 seq86 107 4e-21 seq2552 105 1e-20 seq265336 86.0 1e-14 seq179136 84.2 4e-14 seq99894 84.2 4e-14 seq266 80.6 5e-13 seq116 78.8 2e-12 seq148 73.4 7e-11 >seq93177 Length=399 Score = 185 bits (204), Expect = 2e-44 Identities = 222/297 (75%), Gaps = 6/297 (2%) Strand=Plus/Minus Query 36 TGCTAAATAGCCA---GGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCGGC 92 |||||||||| | ||||| | ||| || || |||||||||||||| | ||| Sbjct 382 TGCTAAATAGTTACGCGGCCCCCCGTGGTCGGCGTCCAACTTCTTAGAGGGACAAGTGGC 323 Query 93 -TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGC 151 | |||| || | | ||| |||||||||||||||||||||||||||||| | |||| Sbjct 322 GTTCAGCCACACGA-GATGGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGC 265 Query 152 CGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGT 211 |||||||||| ||| || | || || |||| | ||| |||| ||| |||| Sbjct 264 TGCACGCGCGCCACAATGGTTGGATCAGCGTGTTCCTACCCTACGCCGACAGGCGCGGGT 205 Query 212 AATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAG 271 ||||| | || | | ||||| | ||||| | | |||||||||||| | | | |||||| Sbjct 204 AATCTGCTGAACCCCATTCGTGATTGGGATTGGGGATTGCAATTATTTCCCATGAACGAG 145 Query 272 GAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| || |||||||||| ||||| ||| ||| ||||||| |||||||||||||||| Sbjct 144 GAATTCCCAGTAAGCGCGGGTCATAAGCTCGCATTGATTAAGTCCCTGCCCTTTGTA 88 >seq164367 Length=300 Score = 176 bits (194), Expect = 9e-42 Identities = 168/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 ||||||||||||||||||||||||||||||| | |||| |||||||||| ||| || | Sbjct 28 GCAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACAATGGTTG 87 Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233 || || |||| | ||| |||| ||| |||||||| | || | | ||||| Sbjct 88 GATCAGCGTGTTCCTACCCTACGCCGACAGGCGCGGGTAATCCGCTGAACCCCATTCGTG 147 Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293 | ||||| | | |||||||||||| | | | |||||||||| || |||||||||| ||| Sbjct 148 ATTGGGATTGGGGATTGCAATTATTTCCCATGAACGAGGAATTCCCAGTAAGCGCGGGTC 207 Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||| ||| ||||||| |||||||||||||||| Sbjct 208 ATAAGCTCGCATTGATTAAGTCCCTGCCCTTTGTA 242 >seq201423 Length=269 Score = 125 bits (138), Expect = 1e-26 Identities = 183/254 (72%), Gaps = 6/254 (2%) Strand=Plus/Minus Query 36 TGCTAAATAGCCA---GGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCGGC 92 |||||||||| | ||||| | ||| || || |||||||||||||| | ||| Sbjct 252 TGCTAAATAGTTACGCGGCCCCCCGTGGTCGGCGTCCAACTTCTTAGAGGGACAAGTGGC 193 Query 93 -TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGC 151 | |||| || | | ||| |||||||||||||||||||||||||||||| | |||| Sbjct 192 GTTCAGCCACACGA-GATGGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGC 135 Query 152 CGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGT 211 |||||||||| ||| || | || || |||| | ||| |||| ||| |||| Sbjct 134 TGCACGCGCGCCACAATGGTTGGATCAGCGTGTTCCTACCCTACGCCGACAGGCGCGGGT 75 Query 212 AATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAG 271 |||| | || | | ||||| | ||||| | | |||||||||||| | | | |||||| Sbjct 74 AATCCGCTGAACCCCATTCGTGATTGGGATTGGGGATTGCAATTATTTCCCATGAACGAG 15 Query 272 GAATGCCTAGTAAG 285 |||| || |||||| Sbjct 14 GAATTCCCAGTAAG 1 >seq102657 Length=397 Score = 122 bits (134), Expect = 2e-25 Identities = 130/172 (76%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 ||||||||||||||||||||||||||||||| | |||| |||||||||| ||| || | Sbjct 172 GCAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACAATGGTTG 113 Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233 || || |||| | ||| |||| ||| |||||||| | || | | ||||| Sbjct 112 GATCAGCGTGTTCCTACCCTACGCCGACAGGCGCGGGTAATCCGCTGAACCCCATTCGTG 53 Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 | ||||| | | |||||||||||| | | | |||||||||| || |||||| Sbjct 52 ATTGGGATTGGGGATTGCAATTATTTCCCATGAACGAGGAATTCCCAGTAAG 1 >seq92278 Length=399 Score = 111 bits (122), Expect = 3e-22 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 208 GGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAA 267 |||||||| | || | | ||||| | ||||| | | |||||||||||| | | | || Sbjct 379 GGGTAATCCGCTGAACCCCATTCGTGATTGGGATTGGGGATTGCAATTATTTCCCATGAA 320 Query 268 CGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGT 327 |||||||| || |||||||||| ||||| ||| ||| ||||||| ||||||||||||||| Sbjct 319 CGAGGAATTCCCAGTAAGCGCGGGTCATAAGCTCGCATTGATTAAGTCCCTGCCCTTTGT 260 Query 328 A 328 | Sbjct 259 A 259 >seq149366 Length=318 Score = 109 bits (120), Expect = 1e-21 Identities = 84/100 (84%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 ||||| | ||||| | | |||||||||||| | | | |||||||||| || ||||||||| Sbjct 13 TCGTGATTGGGATTGGGGATTGCAATTATTTCCCATGAACGAGGAATTCCCAGTAAGCGC 72 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||| ||| ||| ||||||| |||||||||||||||| Sbjct 73 GGGTCATAAGCTCGCATTGATTAAGTCCCTGCCCTTTGTA 112 >seq86 Length=2952897 Score = 107 bits (118), Expect = 4e-21 Identities = 186/266 (70%), Gaps = 11/266 (4%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTC-----AAGCCGATGGAAGTTTGAGGCAATAACAGGTC 126 ||||||||||||| |||| |||||| || || | ||| |||||||||||| Sbjct 21535 CTTCTTAGAGGGATACGCGGCGAGGAGTAAGCCG-TGCGAGATGGAG-CAATAACAGGTC 21592 Query 127 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTC 186 |||||||||||||||||| | |||| ||||| | | |||| |||| | || || | || Sbjct 21593 TGTGATGCCCTTAGATGTCCGGGGCTGCACGTGAGTTACAATGACCGGTTCAGCGGGATC 21652 Query 187 ATCACCTTGGCCGGAAGGTCTG--GGTAATCTTGTTAAACTCTG--TCGTGCTGGGGATA 242 || || | | | ||| || ||| || ||| | | ||||| ||||| Sbjct 21653 CTCCGCTGAGAGGCCCAGCCTGGAGGCGATCCGATTGAACCCCGGAACGTGCCCGGGATT 21712 Query 243 GAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACG 302 | | |||| || | || | | | ||||||||| || |||| ||||| |||| || | | Sbjct 21713 GGGGATTGGAACTGTTCCCCATGCACGAGGAATTCCCAGTAGGCGCGAGTCACCAACTGG 21772 Query 303 CGTTGATTACGTCCCTGCCCTTTGTA 328 | | ||||| |||||||||||||||| Sbjct 21773 CATCGATTAAGTCCCTGCCCTTTGTA 21798 >seq2552 Length=38409 Score = 105 bits (116), Expect = 1e-20 Identities = 187/267 (70%), Gaps = 13/267 (5%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTC-----AAGCCGATGGAAGTTTGAGGCAATAACAGGTC 126 ||||||||||||| |||| |||||| || || | ||| |||||||||||| Sbjct 18218 CTTCTTAGAGGGATACGCGGCGAGGCGTAAGCCG-TGCGAGATGGAG-CAATAACAGGTC 18275 Query 127 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTC 186 |||||||||||||||||| | |||| ||||| | | |||| |||| | || || | || Sbjct 18276 TGTGATGCCCTTAGATGTCCGGGGCTGCACGTGAGTTACAATGACCGGTTCAGCGGGATC 18335 Query 187 ATCACCTTGGCCGGAAGGTCT---GGGTAATCTTGTTAAACTCTG--TCGTGCTGGGGAT 241 || | || || ||| || ||| || ||| | | ||||| ||||| Sbjct 18336 CTC-CACTGAGAGGCTCATCTTGGAGGCGATCCGGTAGAACCCCGGAACGTGCCCGGGAT 18394 Query 242 AGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCAC 301 | | |||| || | || | | | ||||||||| || |||| ||||| |||| || | | Sbjct 18395 TGGGGATTGGAACTGTTCCCCATGCACGAGGAATTCCAAGTAGGCGCGAGTCACCAACTC 18454 Query 302 GCGTTGATTACGTCCCTGCCCTTTGTA 328 || | ||||| |||||||||||||||| Sbjct 18455 GCATCGATTAAGTCCCTGCCCTTTGTA 18481 >seq265336 Length=239 Score = 86.0 bits (94), Expect = 1e-14 Identities = 132/184 (72%), Gaps = 6/184 (3%) Strand=Plus/Plus Query 36 TGCTAAATAGCCA---GGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCGGC 92 |||||||||| | ||||| | ||| || || |||||||||||||| | ||| Sbjct 58 TGCTAAATAGTTACGCGGCCCCCCGTGGTCGGCGTCCAACTTCTTAGAGGGACAAGTGGC 117 Query 93 -TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGC 151 | |||| || | | ||| |||||||||||||||||||||||||||||| | |||| Sbjct 118 GTTCAGCCACACGA-GATGGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGC 175 Query 152 CGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGT 211 |||||||||| ||| || | || || |||| | ||| |||| ||| |||| Sbjct 176 TGCACGCGCGCCACAATGGTTGGATCAGCGTGTTCCTACCCTACGCCGACAGGCGCGGGT 235 Query 212 AATC 215 |||| Sbjct 236 AATC 239 >seq179136 Length=286 Score = 84.2 bits (92), Expect = 4e-14 Identities = 104/138 (75%), Gaps = 6/138 (4%) Strand=Plus/Minus Query 36 TGCTAAATAGCCA---GGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCGGC 92 |||||||||| | ||||| | ||| || || |||||||||||||| | ||| Sbjct 142 TGCTAAATAGTTACGCGGCCCCCCGTGGTCGGCGTCCAACTTCTTAGAGGGACAAGTGGC 83 Query 93 -TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGC 151 | |||| || | | ||| |||||||||||||||||||||||||||||| | |||| Sbjct 82 GTTCAGCCACACGA-GATGGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGC 25 Query 152 CGCACGCGCGCTACACTG 169 |||||||||| ||| || Sbjct 24 TGCACGCGCGCCACAATG 7 >seq99894 Length=399 Score = 84.2 bits (92), Expect = 4e-14 Identities = 104/138 (75%), Gaps = 6/138 (4%) Strand=Plus/Minus Query 36 TGCTAAATAGCCA---GGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCGGC 92 |||||||||| | ||||| | ||| || || |||||||||||||| | ||| Sbjct 142 TGCTAAATAGTTACGCGGCCCCCCGTGGTCGGCGTCCAACTTCTTAGAGGGACAAGTGGC 83 Query 93 -TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGC 151 | |||| || | | ||| |||||||||||||||||||||||||||||| | |||| Sbjct 82 GTTCAGCCACACGA-GATGGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGC 25 Query 152 CGCACGCGCGCTACACTG 169 |||||||||| ||| || Sbjct 24 TGCACGCGCGCCACAATG 7 >seq266 Length=1123263 Score = 80.6 bits (88), Expect = 5e-13 Identities = 99/131 (76%), Gaps = 6/131 (5%) Strand=Plus/Plus Query 36 TGCTAAATAGCCA---GGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCGGC 92 |||||||||| | ||||| | ||| || || |||||||||||||| | ||| Sbjct 523145 TGCTAAATAGTTACGCGGCCCCCCGTGGTCGGCGTCCAACTTCTTAGAGGGACAAGTGGC 523204 Query 93 -TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGC 151 | |||| || | | ||| |||||||||||||||||||||||||||||| | |||| Sbjct 523205 GTTCAGCCACACGA-GATGGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGC 523262 Query 152 CGCACGCGCGC 162 |||||||||| Sbjct 523263 TGCACGCGCGC 523273 >seq116 Length=2379552 Score = 78.8 bits (86), Expect = 2e-12 Identities = 147/207 (71%), Gaps = 8/207 (4%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT-GACA 172 ||| ||| ||||||||||||||||||||||| | | || ||| |||| | ||| | |||| Sbjct 958951 GCAGTAAAAGGTCTGTGATGCCCTTAGATGTCCGGAGCTGCATGCGCACCACAATGGACA 958892 Query 173 GAGCCAACGAGT-TCATCACC--TTGGCCGGAAGG-TCTGGGTAATCTTGTTAAACTCTG 228 || || | || |||| || | ||| ||| | |||||||| | ||| ||| Sbjct 958891 GA-TCAGTGGGTCGCATCGCCCTTCTGCCAACAGGAGCAGGGTAATC-CCATGAACCCTG 958834 Query 229 -TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287 | ||| | ||||| | | ||||||| | || | | || ||||||| || ||||||| Sbjct 958833 TTTGTGATTGGGATTGGGGATTGCAAATCTTCCCCAGGAATGAGGAATTCCAAGTAAGCA 958774 Query 288 CGTGTCATCAGCACGCGTTGATTACGT 314 || ||||| || || ||||||| || Sbjct 958773 CGAGTCATTGGCTTGCATTGATTAGGT 958747 >seq148 Length=1912241 Score = 73.4 bits (80), Expect = 7e-11 Identities = 76/100 (76%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 || || | ||||| | | ||||||||| || | | | || ||||||| || ||||||| Sbjct 132979 TCATGATTGGGATTGGGGATTGCAATTCTTCCCCATAAATGAGGAATTCCAAGTAAGCAT 132920 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||| || | ||||||| |||||||||||||||| Sbjct 132919 GAGTCATAAGGTTGTATTGATTAAGTCCCTGCCCTTTGTA 132880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944514517504