Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq8829 374 2e-101 >seq8829 Length=1066 Score = 374 bits (414), Expect = 2e-101 Identities = 277/321 (86%), Gaps = 2/321 (1%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 533 AGTGCATGTGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCCTGCGAAA 474 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||| Sbjct 473 AGCTGCGGGGAGCTGGCAAACAAGCTTTGATCCGCAGATGTCCGAATGGGGAAACCCGGC 414 Query 121 CCTT-TGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAA 179 || | |||||||| | ||||||||||||||| | | |||||||||| ||||||||||| Sbjct 413 CCGTATGGGTCATCCCTTGCTGAATACATAGGCAAGGGAAGCGAACGCAGCGAACTGAAA 354 Query 180 CATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 239 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 353 CATCTAAGTAGCTGTAGGAACAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 294 Query 240 TGGGATGAGCCTT-TACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCC 298 |||||| |||||| ||| ||| | |||| ||| ||| |||||| ||| Sbjct 293 TGGGATCAGCCTTGTACTCTTTAGCAGTATTGCTAGCAGAACGGAATGGAAAGTCCGGCC 234 Query 299 ATAGCGGGTGATAGCCCCGTA 319 ||||||||||||||||||||| Sbjct 233 ATAGCGGGTGATAGCCCCGTA 213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915796170688