Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq4053 100 5e-19 seq947 100 5e-19 seq2478 98.7 2e-18 seq185864 89.7 8e-16 seq175151 89.7 8e-16 seq101135 89.7 8e-16 seq2552 87.8 3e-15 seq57998 84.2 4e-14 seq61785 80.6 4e-13 seq37819 80.6 4e-13 seq31442 80.6 4e-13 seq34242 75.2 2e-11 seq240546 73.4 6e-11 seq240133 73.4 6e-11 seq183805 73.4 6e-11 seq183344 73.4 6e-11 >seq4053 Length=13973 Score = 100 bits (110), Expect = 5e-19 Identities = 92/114 (81%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||| || | || |||| || || | Sbjct 9745 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGCGTGTGCTTGGCTGAGGAGCCAAT 9688 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 9687 GGTGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 9634 >seq947 Length=183868 Score = 100 bits (110), Expect = 5e-19 Identities = 93/114 (82%), Gaps = 3/114 (3%) Strand=Plus/Plus Query 2 TACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTG 61 ||||||||||||||||| |||||| | |||||| || | || ||| || || || Sbjct 7358 TACGAGAGGAACCGCGGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTTGAGAAGCCAATG 7415 Query 62 CCGCGAAGCTACCATCTGCT-GGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 7416 GGGCGAAGCTACCATCTGCGCGGATTATGACTGAACGCCTCTAAGTCAGAATCC 7469 >seq2478 Length=20962 Score = 98.7 bits (108), Expect = 2e-18 Identities = 98/123 (80%), Gaps = 3/123 (2%) Strand=Plus/Plus Query 2 TACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTG 61 ||||||||||||||||| |||||| | |||||| || | || ||| || || || Sbjct 14397 TACGAGAGGAACCGCGGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTTGAGAAGCCAATG 14454 Query 62 CCGCGAAGCTACCATCTGCT-GGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||| |||||||| |||||||||||||||||||| ||| || | Sbjct 14455 GGGCGAAGCTACCATCTGCGCGGATTATGACTGAACGCCTCTAAGTCAGAGTCCCGGCTA 14514 Query 121 GAA 123 ||| Sbjct 14515 GAA 14517 >seq185864 Length=280 Score = 89.7 bits (98), Expect = 8e-16 Identities = 91/115 (79%), Gaps = 3/115 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | | |||||| | |||||| || | || ||| || || | Sbjct 52 GTACGAGAGGAACCACAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTTGAGAAGCCAAT 109 Query 61 GCCGCGAAGCTACCATCTGCT-GGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 110 GGGGCGAAGCTACCATCTGAGCGGATTATGACTGAACGCCTCTAAGTCAGAATCC 164 >seq175151 Length=289 Score = 89.7 bits (98), Expect = 8e-16 Identities = 91/115 (79%), Gaps = 3/115 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | | |||||| | |||||| || | || ||| || || | Sbjct 148 GTACGAGAGGAACCACAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTTGAGAAGCCAAT 91 Query 61 GCCGCGAAGCTACCATCTGCT-GGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 90 GGGGCGAAGCTACCATCTGAGCGGATTATGACTGAACGCCTCTAAGTCAGAATCC 36 >seq101135 Length=399 Score = 89.7 bits (98), Expect = 8e-16 Identities = 91/115 (79%), Gaps = 3/115 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | | |||||| | |||||| || | || ||| || || | Sbjct 252 GTACGAGAGGAACCACAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTTGAGAAGCCAAT 309 Query 61 GCCGCGAAGCTACCATCTGCT-GGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 310 GGGGCGAAGCTACCATCTGAGCGGATTATGACTGAACGCCTCTAAGTCAGAATCC 364 >seq2552 Length=38409 Score = 87.8 bits (96), Expect = 3e-15 Identities = 96/124 (77%), Gaps = 3/124 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| |||| |||||| | |||||| || || ||| || || | Sbjct 29489 GTACGAGAGGAACAGCGGG-TTCAGAC-ATTTGGTTCATGTCCTTGGTTGAAAAGCCAAT 29546 Query 61 GCCGCGAAGCTACCATCTGCT-GGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119 | ||||||||||||||||| |||||| | ||||||||||||||||| |||||| || Sbjct 29547 GGGGCGAAGCTACCATCTGCGCGGATTACGACTGAACGCCTCTAAGTCGGAATCCCGGCT 29606 Query 120 AGAA 123 |||| Sbjct 29607 AGAA 29610 >seq57998 Length=484 Score = 84.2 bits (92), Expect = 4e-14 Identities = 90/115 (78%), Gaps = 3/115 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | | |||||| | |||||| || | || ||| || || | Sbjct 289 GTACGAGAGGAACCACAGG-TTCAGAC-ATTTGGTTCATGTGCTTGGTTGAGAAGCCAAT 232 Query 61 GCCGCGAAGCTACCATCTGCT-GGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 231 GGGGCGAAGCTACCATCTGAGCGGATTATGATTGAACGCCTCTAAGTCAGAATCC 177 >seq61785 Length=465 Score = 80.6 bits (88), Expect = 4e-13 Identities = 89/115 (77%), Gaps = 3/115 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | | |||||| | |||||| || || ||| || || | Sbjct 161 GTACGAGAGGAACCACAGG-TTCAGAC-ATTTGGTTCATGTCCTTGGTTGAGAAGCCAAT 218 Query 61 GCCGCGAAGCTACCATCTGCT-GGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | | |||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 219 GGGGTGAAGCTACCATCTGAGCGGATTATGACTGAACGCCTCTAAGTCAGAATCC 273 >seq37819 Length=624 Score = 80.6 bits (88), Expect = 4e-13 Identities = 89/115 (77%), Gaps = 3/115 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | | |||||| | || ||| || || ||| || || | Sbjct 239 GTACGAGAGGAACCACAGG-TTCAGAC-ATTTTGTTCATGTCCTTGGTTGAGAAGCCAAT 182 Query 61 GCCGCGAAGCTACCATCTGCT-GGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 181 GGGGCGAAGCTACCATCTGAGCGGATTATGACTGAACGCCTCTAAGTCAGAATCC 127 >seq31442 Length=695 Score = 80.6 bits (88), Expect = 4e-13 Identities = 89/115 (77%), Gaps = 3/115 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | | |||||| | || ||| || || ||| || || | Sbjct 235 GTACGAGAGGAACCACAGG-TTCAGAC-ATTTTGTTCATGTCCTTGGTTGAGAAGCCAAT 178 Query 61 GCCGCGAAGCTACCATCTGCT-GGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 177 GGGGCGAAGCTACCATCTGAGCGGATTATGACTGAACGCCTCTAAGTCAGAATCC 123 >seq34242 Length=662 Score = 75.2 bits (82), Expect = 2e-11 Identities = 88/115 (77%), Gaps = 3/115 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | | |||||| | || ||| || || ||| || || | Sbjct 318 GTACGAGAGGAACCACAGG-TTCAGAC-ATTTTGTTCATGTCCTTGGTTGAGAAGCCAAT 261 Query 61 GCCGCGAAGCTACCATCTGCT-GGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 260 GGGGCGAAGCTACCATCTGAGCGGATTATGATTGAACGCCTCTAAGTCAGAATCC 206 >seq240546 Length=249 Score = 73.4 bits (80), Expect = 6e-11 Identities = 48/52 (92%), Gaps = 1/52 (2%) Strand=Plus/Plus Query 64 GCGAAGCTACCATCTGCT-GGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 22 GCGAAGCTACCATCTGAGCGGATTATGACTGAACGCCTCTAAGTCAGAATCC 73 >seq240133 Length=249 Score = 73.4 bits (80), Expect = 6e-11 Identities = 48/52 (92%), Gaps = 1/52 (2%) Strand=Plus/Plus Query 64 GCGAAGCTACCATCTGCT-GGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 32 GCGAAGCTACCATCTGAGCGGATTATGACTGAACGCCTCTAAGTCAGAATCC 83 >seq183805 Length=282 Score = 73.4 bits (80), Expect = 6e-11 Identities = 48/52 (92%), Gaps = 1/52 (2%) Strand=Plus/Plus Query 64 GCGAAGCTACCATCTGCT-GGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 26 GCGAAGCTACCATCTGAGCGGATTATGACTGAACGCCTCTAAGTCAGAATCC 77 >seq183344 Length=282 Score = 73.4 bits (80), Expect = 6e-11 Identities = 48/52 (92%), Gaps = 1/52 (2%) Strand=Plus/Plus Query 64 GCGAAGCTACCATCTGCT-GGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 26 GCGAAGCTACCATCTGAGCGGATTATGACTGAACGCCTCTAAGTCAGAATCC 77 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 816950001152