Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2913 434 3e-119 seq1673 401 2e-109 seq2552 250 7e-64 seq695 242 1e-61 seq215 156 1e-35 seq270 141 3e-31 seq98402 140 1e-30 seq110214 136 1e-29 seq278999 123 8e-26 seq92090 123 8e-26 seq20 80.6 8e-13 >seq2913 Length=17693 Score = 434 bits (480), Expect = 3e-119 Identities = 411/524 (78%), Gaps = 37/524 (7%) Strand=Plus/Plus Query 4 CTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 |||||||| |||||| | || | |||||| |||||||| ||||| | ||||||||||| Sbjct 10937 CTCATTCCGATTACAGGGCCTCGAAAGAGACCTGTATCGTTATTTTTCGTCACTACCTCA 10996 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10997 CCGTGTCGGTAATGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 11056 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 ||||||| |||||||||||||||||||| |||||||||||||||| | ||||||||||| Sbjct 11057 TCAGGCTTCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGTAGG 11116 Query 183 CCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC- 241 | |||| ||||||||||||||||||||||||| |||||||||| | |||||| | | Sbjct 11117 CACCTATAGTACCATCGAAAGTTGATAGGGCAGACATTTGAATGAGACGTCGCCGCCGCG 11176 Query 242 AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGG 299 |||| | ||||| | | ||||| || ||||||| || | || Sbjct 11177 AAGGGCGCGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGA-------------TGGG 11223 Query 300 TTTTTTATCTAATAAATACACCCCTTCC----------------GAAGTCGG-GGTTTTT 342 |||| ||| |||||| ||| | |||| | |||||| | | || Sbjct 11224 TTTTGGGTCTGATAAATGCACGCGTTCCGCCCCCCCGAGGGGGAGCAGTCGGCGCTCGTT 11283 Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATA 400 ||||||||||||||| |||||||||| ||||||| ||| || || | |||||| Sbjct 11284 TGCATGTATTAGCTCTGGAATTACCACAGTTATCCGAGTAACGTGTGGAGCGATCAAAGG 11343 Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460 ||| ||||||||||||||||||||||||||||||||||||| | | | ||||||| Sbjct 11344 AACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGCCCGTGTGCACTTAGA 11403 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | ||||||||||||||||||||||||||||||| ||||||||| Sbjct 11404 CCTGCATGGCTTAATCTTTGAGACAAGCATATG-TTACTGGCAG 11446 >seq1673 Length=71472 Score = 401 bits (444), Expect = 2e-109 Identities = 404/524 (77%), Gaps = 37/524 (7%) Strand=Plus/Plus Query 4 CTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 |||||||| |||||| | || | |||||| ||||||||| ||||| | ||||||||||| Sbjct 54389 CTCATTCCGATTACAGGGCCTCGAAAGAGACCTGTATCATTATTTTTCGTCACTACCTCA 54448 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 ||||||||| | ||||||||||| || ||||||||||||||||||||||||||| ||||| Sbjct 54449 CCGTGTCGGTAATGGGTAATTTGTGCACCTGCTGCCTTCCTTGGATGTGGTAGCGGTTTC 54508 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 |||||||||||||||||||||||||||| ||||||| | |||||| | ||||||||||| Sbjct 54509 TCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCTTGACCCGTGGTCACCATGGTAGG 54568 Query 183 CCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC- 241 | |||| ||||||||||||||||||||||||| |||||||||| | ||| || | | Sbjct 54569 CACCTATAGTACCATCGAAAGTTGATAGGGCAGACATTTGAATGAGACGTCGTCGCCGCA 54628 Query 242 AAGGCCATGCGATT--CGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGG 299 |||| | |||||| | | ||||| || | ||||| || | || Sbjct 54629 AAGGGCGCGCGATTGGCCCGAGGTTATCTAGAGTAACCAAAGA-------------TGGG 54675 Query 300 TTTTTTATCTAATAAATACACCCCTTCC----------------GAAGTC-GGGGTTTTT 342 |||| ||| |||||| ||| | |||| | |||| | | | || Sbjct 54676 TTTTGGGTCTGATAAATGCACTCGTTCCGCCCCCCCGAGGGGGAGCAGTCAGCGCTCATT 54735 Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATA 400 | ||||||||||||| |||||||||| ||||||| ||| || || | |||||| Sbjct 54736 TGTATGTATTAGCTCTGGAATTACCACAGTTATCCGAGTAACGTGTGGAGCGATCAAAGG 54795 Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460 ||| ||||||||||||||||||||||||||||||||||||| | | | ||||||| Sbjct 54796 AACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGCCCGTGTGCACTTAGA 54855 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||| ||||||||| Sbjct 54856 TCTGCATGGCTTAATCTTTGAGACAAGCATATG-TTACTGGCAG 54898 >seq2552 Length=38409 Score = 250 bits (276), Expect = 7e-64 Identities = 185/215 (86%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 42 GTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTC 101 |||||| | ||||||||||| ||||||||| | ||||||||||||||||||||||||||| Sbjct 16271 GTATTTTTCGTCACTACCTCGCCGTGTCGGCAATGGGTAATTTGCGCGCCTGCTGCCTTC 16212 Query 102 CTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTT 161 | |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct 16211 CGTGGATGTGGTAGCCATTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTT 16152 Query 162 ACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTT 221 |||||| | ||||||| || ||| || || || |||||| |||||||||||| || Sbjct 16151 ACCCGTCGTAACCATGGAAGTCCAATACACTGCCGTCGAAAATTGATAGGGCAGGTGCTT 16092 Query 222 GAATGAACCATCGCCGGCTCA--AGGCCATGCGAT 254 |||||| | ||||||||||| || || |||||| Sbjct 16091 GAATGATACGTCGCCGGCTCAAGAGACCGTGCGAT 16057 Score = 96.9 bits (106), Expect = 1e-17 Identities = 86/105 (82%), Gaps = 7/105 (7%) Strand=Plus/Minus Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCAT-GTAGTAAGGTAC-TA-----TC 395 |||||||||||||||| |||||||||| |||||||| | | || || || || Sbjct 15868 AGCATGTATTAGCTCTGGAATTACCACAGTTATCCAACGGACAAACGTGTGTAGCGGGTC 15809 Query 396 AAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGT 440 ||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 15808 AAAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGT 15764 >seq695 Length=292523 Score = 242 bits (268), Expect = 1e-61 Identities = 158/174 (91%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 42 GTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTC 101 |||||| | ||||||||||| ||||||||| | ||||||||||||||||||||||||||| Sbjct 247322 GTATTTTTCGTCACTACCTCGCCGTGTCGGCAATGGGTAATTTGCGCGCCTGCTGCCTTC 247263 Query 102 CTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTT 161 |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct 247262 CTTGGATGTGGTAGCCATTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTT 247203 Query 162 ACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAG 215 |||||| | |||| |||||| ||| || || ||||||||||||||||| |||| Sbjct 247202 ACCCGTCGCTACCGTGGTAGTCCAATACACTGCCATCGAAAGTTGATAGCGCAG 247149 >seq215 Length=1345886 Score = 156 bits (172), Expect = 1e-35 Identities = 176/235 (75%), Gaps = 17/235 (7%) Strand=Plus/Minus Query 4 CTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||| || || || | |||||| | |||||| ||||| | ||||||||||| Sbjct 1103025 CTCATTCTGGTTCCAGAGCCTCAAAAGCGACCTGTACTGTTATTTTTCGTCACTACCTCA 1102966 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 | ||||| | | |||||||||||| |||||||||| ||||||||| |||||| || |||| Sbjct 1102965 CTGTGTCTGTAATGGGTAATTTGCTCGCCTGCTGCTTTCCTTGGAGGTGGTAACCATTTC 1102906 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 ||| |||||| || |||| ||||||||| | |||||||||| Sbjct 1102905 TCAATCTCCCT-TC---------TCCCT------TGGTTACCCGTGGTCACCATGGTAGA 1102862 Query 183 CCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 | | | |||||||||| ||||||||||||||| ||||||||||| |||| ||| Sbjct 1102861 CACATGTACTACCATCGAGAGTTGATAGGGCAGACATTTGAATGAAACATCACCG 1102807 >seq270 Length=1097561 Score = 141 bits (156), Expect = 3e-31 Identities = 134/168 (80%), Gaps = 6/168 (4%) Strand=Plus/Plus Query 342 TAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT----ACT-ATCA 396 |||||||||| || | |||||||||| | |||||| | | | ||| | | |||| Sbjct 425294 TAGCATGTATGTACTATGGAATTACCACAGCTATCCAAGAACAATGGTGTGGAGTGATCA 425353 Query 397 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACT 456 || ||| ||||||||||||||||||||||||||||||||||||| | | | | || Sbjct 425354 AAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAATGCTCATGTGTCCT 425413 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||| |||||| |||||||||||||||||||||||| ||||||||| Sbjct 425414 TAGACCTGCATGACTTAATCTTTGAGACAAGCATATG-TTACTGGCAG 425460 Score = 136 bits (150), Expect = 1e-29 Identities = 119/148 (80%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 80 AATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGG 139 ||||||| | ||||||||||||| ||||||||||| | ||| ||||||||||||||| || Sbjct 424991 AATTTGCACACCTGCTGCCTTCCATGGATGTGGTATCTGTTCCTCAGGCTCCCTCTCTGG 425050 Query 140 AATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCG 199 |||| |||||| ||||| ||||||| | | | ||| ||||||| || | ||||| Sbjct 425051 AATCAAACCCTGATTCCATGTTACCCATGGTCAGCATTGTAGGCCCATACATTGCCATCA 425110 Query 200 AAAGTTGATAGGGCAGAAATTTGAATGA 227 ||||||||| |||||| |||||||| Sbjct 425111 AAAGTTGATCAGGCAGATGCTTGAATGA 425138 >seq98402 Length=399 Score = 140 bits (154), Expect = 1e-30 Identities = 138/172 (80%), Gaps = 11/172 (6%) Strand=Plus/Plus Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCAT-GTAGTAAGGTAC-TA-----TC 395 |||||||||||||||| |||||||||| |||||||| | | || || || || Sbjct 90 AGCATGTATTAGCTCTGGAATTACCACAGTTATCCAACGGACAAACGTGTGTAGCGGGTC 149 Query 396 AAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGT-ATAGATTGCTTAT- 453 ||| ||| |||||||||||||||||||||||||||||||||||| | || | | | Sbjct 150 AAAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTCACCAATCCCGTGTG 209 Query 454 -ACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||| || |||||||||||||| ||||||||||||||| | ||||||||| Sbjct 210 AACTTACACTTGCATGGCTTAATCCTTGAGACAAGCATAT-AATACTGGCAG 260 >seq110214 Length=383 Score = 136 bits (150), Expect = 1e-29 Identities = 136/172 (79%), Gaps = 11/172 (6%) Strand=Plus/Plus Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCAT-GTAGTAAGGTAC-TA-----TC 395 |||||||||||||||| |||||||||| |||||||| | | || || || || Sbjct 90 AGCATGTATTAGCTCTGGAATTACCACAGTTATCCAACGGACAAACGTGTGTAGCGGGTC 149 Query 396 AAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT---GCTTA 452 ||| ||| |||||||||||||||||||||||||||||||||||| | | | | Sbjct 150 AAAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTCACCAGTCCCGTGTG 209 Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||| || |||||||||||||| ||||||||||||||| | ||||||||| Sbjct 210 AACTTACACTTGCATGGCTTAATCCTTGAGACAAGCATAT-AATACTGGCAG 260 >seq278999 Length=235 Score = 123 bits (136), Expect = 8e-26 Identities = 90/103 (87%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 4 CTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 |||||||| |||||| | || | |||||| |||||||| ||||| | ||||||||||| Sbjct 133 CTCATTCCGATTACAGGGCCTCGAAAGAGACCTGTATCGTTATTTTTCGTCACTACCTCA 192 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTG 105 ||||||||| | ||||||||||||||||||||||||||||||| Sbjct 193 CCGTGTCGGTAATGGGTAATTTGCGCGCCTGCTGCCTTCCTTG 235 >seq92090 Length=399 Score = 123 bits (136), Expect = 8e-26 Identities = 90/103 (87%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 4 CTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 |||||||| |||||| | || | |||||| |||||||| ||||| | ||||||||||| Sbjct 103 CTCATTCCGATTACAGGGCCTCGAAAGAGACCTGTATCGTTATTTTTCGTCACTACCTCA 44 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTG 105 ||||||||| | ||||||||||||||||||||||||||||||| Sbjct 43 CCGTGTCGGTAATGGGTAATTTGCGCGCCTGCTGCCTTCCTTG 1 >seq20 Length=5608301 Score = 80.6 bits (88), Expect = 8e-13 Identities = 79/101 (78%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAG--GTACTATCAAA 398 |||||||||||||||||| |||||||||| |||||| ||| | | | || | ||| Sbjct 1325477 TTAGCATGTATTAGCTCTGGAATTACCACAGTTATCTGAGTAACATGTAGAACAACCAAG 1325418 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTG 439 ||| ||||||| |||||| ||||| | ||||||| |||| Sbjct 1325417 GGAACCATAACTGCTTTAATTAGCCACTGGCAGTTTTACTG 1325377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1506117744128