Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq12 113 4e-20 seq2 89.7 4e-13 >seq12 Length=6316961 Score = 113 bits (124), Expect = 4e-20 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || ||| |||||||||||||||| | ||||| ||||| ||||| |||||||| | Sbjct 2155219 TGGAGCGCTTCATGCAGGAGGTGCAAGTGACAGAGGCACGTTGCTTCTATGGCTTCCAAA 2155160 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 ||||||||||||| | ||||| ||||||||||| | || || || || || |||| Sbjct 2155159 TTGCCATGGAGAACATTCACTCAGAGATGTACAGCTTGCTTATTGACACATATATCA 2155103 >seq2 Length=9864463 Score = 89.7 bits (98), Expect = 4e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 ||||||||||| || | || || || | |||||| |||||||| || ||| |||||| Sbjct 2388469 CAGGAGGTGCAGGTCCCAGAAGCACGCTCTTTCTATGGCTTCCAAATCCTCATAGAGAAT 2388528 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 || ||||||||||||||||| | || ||| | || |||||||| || Sbjct 2388529 GTGCACTCGGAGATGTACAGCATGCTGATCAACACCTACATCAGAGA 2388575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396194253223520