Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhamphochromis_20esox_20[genbank_20GCA_5F000150935.1_202008-07-09] 55,751 sequences; 71,295,074 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq50999 116 8e-24 seq43840 116 8e-24 >seq50999 Length=1483 Score = 116 bits (128), Expect = 8e-24 Identities = 122/158 (77%), Gaps = 3/158 (2%) Strand=Plus/Plus Query 39 TGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCC--TCCCGTAGGA 96 || |||| |||| |||||| |||||| |||| ||||| |||||||||| | | | Sbjct 324 TGACTGGTTCAGCCTTTCGGCCATTGACCAAGATTCCGCACTGCTGCCGATACTTTGCTC 383 Query 97 GTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCG 156 || ||| || | ||||| | ||| |||| ||||||||||||||||||| || |||| Sbjct 384 GTGTGGGCCTT-TCTCATTCCCACTGTGGTTGATCATCCTCTCAGACCAACTATAGATCA 442 Query 157 TCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 | | |||||| |||| |||||| |||||||| |||||| Sbjct 443 TTGGCTTGGTAAGCCGTTACCTTACCAACTACCTAATC 480 >seq43840 Length=1377 Score = 116 bits (128), Expect = 8e-24 Identities = 122/158 (77%), Gaps = 3/158 (2%) Strand=Plus/Minus Query 39 TGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCC--TCCCGTAGGA 96 || |||| |||| |||||| |||||| |||| ||||| |||||||||| | | | Sbjct 548 TGACTGGTTCAGCCTTTCGGCCATTGACCAAGATTCCGCACTGCTGCCGATACTTTGCTC 489 Query 97 GTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCG 156 || ||| || | ||||| | ||| |||| ||||||||||||||||||| || |||| Sbjct 488 GTGTGGGCCTT-TCTCATTCCCACTGTGGTTGATCATCCTCTCAGACCAACTATAGATCA 430 Query 157 TCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 | | |||||| |||| |||||| |||||||| |||||| Sbjct 429 TTGGCTTGGTAAGCCGTTACCTTACCAACTACCTAATC 392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071402349280