Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhamphochromis_20esox_20[genbank_20GCA_5F000150935.1_202008-07-09] 55,751 sequences; 71,295,074 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq50999 84.2 4e-14 seq43840 84.2 4e-14 >seq50999 Length=1483 Score = 84.2 bits (92), Expect = 4e-14 Identities = 110/150 (73%), Gaps = 3/150 (2%) Strand=Plus/Plus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCC--TCCCGTAGGAGTCTGGGC 70 |||| |||| |||||| ||| || || |||||||||| | | | || ||||| Sbjct 332 TCAGCCTTTCGGCCATTGACCAAGATTCCGCACTGCTGCCGATACTTTGCTCGTGTGGGC 391 Query 71 CGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTG 130 | | ||||| ||||| ||||| | ||| |||||||| || ||| |||| | |||||| Sbjct 392 CTT-TCTCATTCCCACTGTGGTTGATCATCCTCTCAGACCAACTATAGATCATTGGCTTG 450 Query 131 GTGGGCTATTATCTCACCAACTACCTAATC 160 || || ||| || ||||||||||||||| Sbjct 451 GTAAGCCGTTACCTTACCAACTACCTAATC 480 >seq43840 Length=1377 Score = 84.2 bits (92), Expect = 4e-14 Identities = 110/150 (73%), Gaps = 3/150 (2%) Strand=Plus/Minus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCC--TCCCGTAGGAGTCTGGGC 70 |||| |||| |||||| ||| || || |||||||||| | | | || ||||| Sbjct 540 TCAGCCTTTCGGCCATTGACCAAGATTCCGCACTGCTGCCGATACTTTGCTCGTGTGGGC 481 Query 71 CGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTG 130 | | ||||| ||||| ||||| | ||| |||||||| || ||| |||| | |||||| Sbjct 480 CTT-TCTCATTCCCACTGTGGTTGATCATCCTCTCAGACCAACTATAGATCATTGGCTTG 422 Query 131 GTGGGCTATTATCTCACCAACTACCTAATC 160 || || ||| || ||||||||||||||| Sbjct 421 GTAAGCCGTTACCTTACCAACTACCTAATC 392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 997843382016