Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhamphochromis_20esox_20[genbank_20GCA_5F000150935.1_202008-07-09] 55,751 sequences; 71,295,074 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq50999 89.7 1e-15 seq43840 89.7 1e-15 >seq50999 Length=1483 Score = 89.7 bits (98), Expect = 1e-15 Identities = 116/158 (73%), Gaps = 3/158 (2%) Strand=Plus/Plus Query 40 TGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCC--TCCCGTAGGA 97 || ||| |||| ||| || |||||| ||| ||||| |||||||||| | | | Sbjct 324 TGACTGGTTCAGCCTTTCGGCCATTGACCAAGATTCCGCACTGCTGCCGATACTTTGCTC 383 Query 98 GTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCG 157 || ||| || | ||||| | ||| ||||| || |||||||||||||||| ||| |||| Sbjct 384 GTGTGGGCCTT-TCTCATTCCCACTGTGGTTGATCATCCTCTCAGACCAACTATAGATCA 442 Query 158 TCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATC 195 | | || ||| ||| ||||| ||||||| |||||| Sbjct 443 TTGGCTTGGTAAGCCGTTACCTTACCAACTACCTAATC 480 >seq43840 Length=1377 Score = 89.7 bits (98), Expect = 1e-15 Identities = 116/158 (73%), Gaps = 3/158 (2%) Strand=Plus/Minus Query 40 TGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCC--TCCCGTAGGA 97 || ||| |||| ||| || |||||| ||| ||||| |||||||||| | | | Sbjct 548 TGACTGGTTCAGCCTTTCGGCCATTGACCAAGATTCCGCACTGCTGCCGATACTTTGCTC 489 Query 98 GTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCG 157 || ||| || | ||||| | ||| ||||| || |||||||||||||||| ||| |||| Sbjct 488 GTGTGGGCCTT-TCTCATTCCCACTGTGGTTGATCATCCTCTCAGACCAACTATAGATCA 430 Query 158 TCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATC 195 | | || ||| ||| ||||| ||||||| |||||| Sbjct 429 TTGGCTTGGTAAGCCGTTACCTTACCAACTACCTAATC 392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1221718499776