Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhamphochromis_20esox_20[genbank_20GCA_5F000150935.1_202008-07-09] 55,751 sequences; 71,295,074 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq43840 147 7e-33 seq50999 140 1e-30 >seq43840 Length=1377 Score = 147 bits (162), Expect = 7e-33 Identities = 236/334 (71%), Gaps = 9/334 (3%) Strand=Plus/Plus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226 |||||| ||||||||||||||||||||||||||| | | |||| ||| | ||||||| Sbjct 392 GATTAGGTAGTTGGTAAGGTAACGGCTTACCAAGCCAATGATCTATAGTTGGTCTGAGAG 451 Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGA--GGCAGCAGTG 284 | ||||| ||||| ||| | ||||| | || ||| || | | | |||||||||| Sbjct 452 GATGATCAACCACAGTGGGAATGAGA-AAGGCCCACACGAGCAAAGTATCGGCAGCAGTG 510 Query 285 GGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCC 344 ||||| ||| |||||| | |||| |||| ||| || | || |||||| | Sbjct 511 CGGAATCTTGGTCAATGGCCGAAAGGCTGAACCAGTCAC----CTAGAAGGATGAAAACA 566 Query 345 TTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCC 404 || | ||||| || | ||||| ||||||||| |||||| | || ||| Sbjct 567 TTAATTTGATAAAGTCCTAACGGAAAGGAGGATAATGACTGTACTTTCCTATTAA-TCCC 625 Query 405 GGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTAC 464 | | || ||||||||||| |||||||||||| |||| ||| |||| | |||| Sbjct 626 GACCAATCTCGTGCCAGCAGTCGCGGTAATACGAGAGGGGTAAGCATTATTCATCATTAA 685 Query 465 TGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAG 498 |||| | |||||||| |||||| || || |||| Sbjct 686 TGGGTC-TAAAGGGTACGTAGGCTGTCTCATAAG 718 >seq50999 Length=1483 Score = 140 bits (154), Expect = 1e-30 Identities = 236/335 (70%), Gaps = 10/335 (3%) Strand=Plus/Minus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226 |||||| ||||||||||||||||||||||||||| | | |||| ||| | ||||||| Sbjct 480 GATTAGGTAGTTGGTAAGGTAACGGCTTACCAAGCCAATGATCTATAGTTGGTCTGAGAG 421 Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGA--GGCAGCAGTG 284 | ||||| ||||| ||| | ||||| | || ||| || | | | |||||||||| Sbjct 420 GATGATCAACCACAGTGGGAATGAGA-AAGGCCCACACGAGCAAAGTATCGGCAGCAGTG 362 Query 285 GGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCC 344 ||||| ||| |||||| | |||| |||| ||| || | || |||||| | Sbjct 361 CGGAATCTTGGTCAATGGCCGAAAGGCTGAACCAGTCAC----CTAGAAGGATGAAAACA 306 Query 345 TTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCC 404 || | ||||| || | ||||| ||||||||| |||||| | || ||| Sbjct 305 TTAATTTGATAAAGTCCTAACGGAAAGGAGGATAATGACTGTACTTTCCTATTAA-TCCC 247 Query 405 GGCTAACTACGTGCCAGCAGCCGC-GGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 463 | | || ||||||||||| ||| ||||||||| |||| ||| |||| | |||| Sbjct 246 GACCAATCTCGTGCCAGCAGTCGCTGGTAATACGAGAGGGGTAAGCATTATTCATCATTA 187 Query 464 CTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAG 498 |||| | |||||||| |||||| || || |||| Sbjct 186 ATGGGTC-TAAAGGGTACGTAGGCTGTCTCATAAG 153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1496765073024