Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhamphochromis_20esox_20[genbank_20GCA_5F000150935.1_202008-07-09] 55,751 sequences; 71,295,074 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq43840 104 6e-20 >seq43840 Length=1377 Score = 104 bits (114), Expect = 6e-20 Identities = 215/316 (68%), Gaps = 17/316 (5%) Strand=Plus/Plus Query 29 CGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAA 88 ||||||||||| |||||||||||| |||| ||| |||| | |||| |||| ||| Sbjct 635 CGTGCCAGCAGTCGCGGTAATACGAGAGGGGTAAGCATTATTCATCATTAATGGGTCTAA 694 Query 89 AGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGGGACT- 147 ||||| |||||| || || |||| | | || | || || || |||| Sbjct 695 AGGGTACGTAGGCTGTCTCATAAGACTG----GATGGTCTCGAACTAAAT-----GACTA 745 Query 148 ---GCTTTTGA--AACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTA 202 ||||| | |||| |||||||| | | || || |||| ||| || ||| Sbjct 746 AGAGCTTTCCAGTAACTATGAAACTAGAGTGTAATGGAGGACAGAGGAACTCCGAGAGTA 805 Query 203 GCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGT 262 | | || ||| | ||| | ||| || | | ||||||||| ||| || ||| Sbjct 806 GGGATGGAATCTATTGATCCTCGGAAGACCGCTTAAGGCGAAGGCTTCTTTCTA-ACTAA 864 Query 263 A-ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCC 321 | |||||| |||||| |||||| ||||||||||| |||||||| |||| ||||||| Sbjct 865 ACACTGACGCTGAGGTACGAAAGTATGGGGAGCAAAACGGATTAGAGACCCGTGTAGTCC 924 Query 322 ACGCCGTAAACGATGA 337 | ||||||||||||| Sbjct 925 ATACCGTAAACGATGA 940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202529203968