Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhamphochromis_20esox_20[genbank_20GCA_5F000150935.1_202008-07-09] 55,751 sequences; 71,295,074 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq50999 102 2e-19 seq43840 102 2e-19 >seq50999 Length=1483 Score = 102 bits (112), Expect = 2e-19 Identities = 129/175 (74%), Gaps = 7/175 (4%) Strand=Plus/Plus Query 107 TTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACT 166 |||||||||| || || ||||||||| || ||| ||||||||||| ||||| |||| Sbjct 310 TTCATCCTTC----TAGGTGACTGGTTCAGCCTTTCGGCCATTGACCAAGATTCCGCACT 365 Query 167 GCTGCC--TCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||| | | | || ||| || | ||||| | ||| ||||| || | |||||| Sbjct 366 GCTGCCGATACTTTGCTCGTGTGGGCC-TTTCTCATTCCCACTGTGGTTGATCATCCTCT 424 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 |||| | |||| ||| | |||| ||| ||||||||| || |||||||||| Sbjct 425 CAGACCAACTATAGATCATTGGCTTGGTAAGCCGTTACCTTACCAACTACCTAAT 479 >seq43840 Length=1377 Score = 102 bits (112), Expect = 2e-19 Identities = 129/175 (74%), Gaps = 7/175 (4%) Strand=Plus/Minus Query 107 TTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACT 166 |||||||||| || || ||||||||| || ||| ||||||||||| ||||| |||| Sbjct 562 TTCATCCTTC----TAGGTGACTGGTTCAGCCTTTCGGCCATTGACCAAGATTCCGCACT 507 Query 167 GCTGCC--TCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||| | | | || ||| || | ||||| | ||| ||||| || | |||||| Sbjct 506 GCTGCCGATACTTTGCTCGTGTGGGCC-TTTCTCATTCCCACTGTGGTTGATCATCCTCT 448 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 |||| | |||| ||| | |||| ||| ||||||||| || |||||||||| Sbjct 447 CAGACCAACTATAGATCATTGGCTTGGTAAGCCGTTACCTTACCAACTACCTAAT 393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068204133312