Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmo_20salar_20[refseq_20GCF_5F000233375.1_202015-06-10] 232,155 sequences; 2,966,890,203 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq86992 73.4 8e-11 >seq86992 Length=7178 Score = 73.4 bits (80), Expect = 8e-11 Identities = 86/115 (75%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT-CGCCTCCCAAAGAGTAACGGAGGCG 171 ||| ||||||| |||| ||||||||||||||||| | || |||| |||||| ||| | Sbjct 5820 GACCGTGTCAGGCGGGGAGTTTGACTGGGGCGGTACATCTGTCAAAAGGTAACGCAGGTG 5879 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAG 226 || ||| |||||| ||| ||||||| ||| | ||| || |||||||| Sbjct 5880 TCCTAAGGCGAGCTCAGCGAGGACGGAAACCTCGCGTAGAGTAAAAGGGCAAAAG 5934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 980119309280