Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmo_20salar_20[refseq_20GCF_5F000233375.1_202015-06-10] 232,155 sequences; 2,966,890,203 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq200793 73.4 6e-11 >seq200793 Length=1027 Score = 73.4 bits (80), Expect = 6e-11 Identities = 81/105 (77%), Gaps = 6/105 (6%) Strand=Plus/Plus Query 173 CTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACC 232 ||||||| ||||| ||| |||||||||| ||| || |||||||| ||||| ||||| Sbjct 78 CTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAATGGGTGAACAATCCAACG 137 Query 233 CTTGG-GAC--CTACTTCAGCCCCAGGATGAGACGAGCCGACATC 274 ||||| || || ||||| | | ||| ||| ||||||||||| Sbjct 138 CTTGGTGAATTCTGCTTCA---CAATGATAAGAAGAGCCGACATC 179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 779043979580