Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12-
02] 156,044 sequences; 695,008,792 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq144678 239 8e-61
seq12045 95.1 2e-17
seq60797 73.4 7e-11
>seq144678
Length=1950
Score = 239 bits (264), Expect = 8e-61
Identities = 204/248 (82%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||||||||||| |||| ||| |||| |||| ||||||||||||||
Sbjct 1539 CTGTTACTTTGAAGAAATTAGAGTGCTCAATGCAAGCCTACGCTCTGAATACATTAGCAT 1598
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| |||| | |||||| | |||| ||||| |||||| | ||| || ||||||||
Sbjct 1599 GGGATAACATCATAGGATTT-CGGTCCTATTCTGTTGGCCTTCGGGATCGGAGTAATGAT 1657
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 1658 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 1717
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 1718 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 1776
Query 311 GTTAGGGG 318
||| ||||
Sbjct 1777 GTTGGGGG 1784
>seq12045
Length=232
Score = 95.1 bits (104), Expect = 2e-17
Identities = 90/113 (80%), Gaps = 3/113 (3%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| ||| || ||| | | | ||||||||||||||||||||||||
Sbjct 119 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 60
Query 98 TCAAAGCAGGCC--TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGAC 148
|||||||||||| | || |||||| ||| |||||||| |||||||||
Sbjct 59 TCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAGGAATAATGGAATAGGAC 7
>seq60797
Length=68919
Score = 73.4 bits (80), Expect = 7e-11
Identities = 77/98 (79%), Gaps = 4/98 (4%)
Strand=Plus/Plus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC--TTTGCTCGAATACATTAGCATG 131
||| ||||| ||||| | || ||||||||||||||| | ||| |||||| ||| |
Sbjct 14001 TTTGCTTTGGAAAAAAT-GACTGTTCAAAGCAGGCCCAGTCGCTTGAATACTGCAGCTAG 14059
Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGT 169
||| || ||||||||| || ||||||||||||| |||
Sbjct 14060 GAAAAAAGGAATAGGAC-TGTGGTTCTATTTTGTGGGT 14096
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 913771885312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |