Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12- 02] 156,044 sequences; 695,008,792 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq144678 80.6 3e-13 seq12045 73.4 5e-11 >seq144678 Length=1950 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||||| | ||||| Sbjct 1635 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATTCAGAGCGTA 1577 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || ||| |||| ||||||||||| |||| |||| || Sbjct 1576 GGCTTGCATTGAGCACTCTAATTTCTTCAAAGTAACAG 1539 >seq12045 Length=232 Score = 73.4 bits (80), Expect = 5e-11 Identities = 63/77 (82%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAAG--CCTGCTTTGAACACTCT 90 ||||||||| |||||||| ||| |||||| |||| | ||||||||||||||||| Sbjct 7 GTCCTATTCCATTATTCCTAGCTGCGGTATTCAGGCGACCGGGCCTGCTTTGAACACTCT 66 Query 91 AATTTTCTCAAGGTAAA 107 |||||| |||| ||||| Sbjct 67 AATTTTTTCAAAGTAAA 83 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594300250296