Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scartelaos_20histophorus_20[genbank_20GCA_5F000787155.1_202014-12- 02] 156,044 sequences; 695,008,792 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq7310 255 1e-65 seq1804 159 7e-37 >seq7310 Length=218 Score = 255 bits (282), Expect = 1e-65 Identities = 184/211 (87%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 118 TAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCC 177 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 218 TAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTC 159 Query 178 AACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGG 237 ||||||| || ||||||||| ||| | |||||||||| | ||| | ||||| ||| Sbjct 158 AACGAGTCTATAGCCTTGGCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGG 100 Query 238 GGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCA 297 ||||||| |||||||||| ||| ||||||||||||||| ||||||||||||| ||||||| Sbjct 99 GGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCA 40 Query 298 GCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || |||||||| ||||||||||||||||||| Sbjct 39 GCTCGCGTTGACTACGTCCCTGCCCTTTGTA 9 >seq1804 Length=204 Score = 159 bits (176), Expect = 7e-37 Identities = 151/193 (78%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 136 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTG 195 ||||||||| | |||| |||||||||| |||||||| | || || || | ||||| Sbjct 1 CTTAGATGTCCGGGGCTGCACGCGCGCCACACTGACTGGATCAGCGTGTGTCTACCCTTG 60 Query 196 GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255 |||| ||| |||||||| | | || | | ||||| | ||||| | | ||||||||| Sbjct 61 GCCGAGAGGCCTGGGTAACCCGCTGAACCCCACTCGTGATAGGGATTGGGGATTGCAATT 120 Query 256 ATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315 ||| | | | |||||||||| || |||||||||| ||||| ||| ||||||||||| ||| Sbjct 121 ATTTCCCATGAACGAGGAATTCCCAGTAAGCGCGGGTCATAAGCTCGCGTTGATTAAGTC 180 Query 316 CCTGCCCTTTGTA 328 ||||||||||||| Sbjct 181 CCTGCCCTTTGTA 193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 945721951232