Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scleropages_20formosus_20[refseq_20GCF_5F001624265.1_202016-04-20] 4,819 sequences; 777,359,276 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq3953 87.8 1e-15 seq3996 73.4 2e-11 >seq3953 Length=1850374 Score = 87.8 bits (96), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 3/82 (4%) Strand=Plus/Minus Query 43 AAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCA 102 |||| |||||||| |||| || ||||||||| ||||||||||| |||||||||||||| Sbjct 289568 AAAGACCTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCA 289511 Query 103 GGGACGTAATACAACGCAAGCT 124 ||||| |||| |||||| |||| Sbjct 289510 GGGACTTAAT-CAACGCGAGCT 289490 >seq3996 Length=2349521 Score = 73.4 bits (80), Expect = 2e-11 Identities = 69/84 (82%), Gaps = 3/84 (4%) Strand=Plus/Plus Query 41 CGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGG 100 |||||| |||||||| |||| | | ||||||| | || |||||| ||| |||||||| Sbjct 2253179 CGAAAGACCTCACTAAACCATCTAAAG-GGTAGTA-GTGATGGGCGGTGTGCACAAAGGG 2253236 Query 101 CAGGGACGTAATACAACGCAAGCT 124 ||||||| |||| ||||||||||| Sbjct 2253237 CAGGGACTTAAT-CAACGCAAGCT 2253259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300786410420