Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scleropages_20formosus_20[refseq_20GCF_5F001624265.1_202016-04-20] 4,819 sequences; 777,359,276 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq3977 86.0 1e-14 seq4492 82.4 1e-13 >seq3977 Length=9255366 Score = 86.0 bits (94), Expect = 1e-14 Identities = 86/109 (79%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||| | || | || |||| || || | Sbjct 7724905 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGATTGGCTGAGGAGCCAAT 7724848 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAG 109 | || | ||||||||||| |||||||| ||||||||||||||||||| Sbjct 7724847 GGTGCAACGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAG 7724799 >seq4492 Length=11537332 Score = 82.4 bits (90), Expect = 1e-13 Identities = 87/112 (78%), Gaps = 2/112 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||| || | ||||| | || | | |||| || || | Sbjct 8583523 GTACGAGAGGAACCGCAGG-TTCA-AACATTTGGTGTATGTGCTTAGCTGAGGAGCCAAT 8583466 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAAT 112 | | | ||||||||||| |||||||| |||||||||||||||||||||| Sbjct 8583465 GGTACAATGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAAT 8583414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819161756416