Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scleropages_20formosus_20[refseq_20GCF_5F001624265.1_202016-04-20] 4,819 sequences; 777,359,276 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq3939 100 1e-15 seq4482 91.5 6e-13 >seq3939 Length=3302458 Score = 100 bits (110), Expect = 1e-15 Identities = 118/158 (75%), Gaps = 4/158 (3%) Strand=Plus/Minus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 ||||| | |||| || ||||||||| || ||| || | |||||||| | | |||||| Sbjct 1415589 CTCGATGAGCATGCCGATGGTCATGCGGGAGGGGAAGCCGTGCGGGTTGAACAAGATGTC 1415530 Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCAC--CAGGCCGTTG 449104 |||| || |||| | | ||||||||| ||||||| | | |||| | ||| | Sbjct 1415529 GGGCATCATGCCGCTCTCCGCGAAGGGCATATCCTCGGCG--GGCCACAGCCGGCTCAGG 1415472 Query 449105 ACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCC 449142 | |||||||||||||||||||||| ||||||||| || Sbjct 1415471 ATGCCCTTCTGGCCGTGGCGGCTGGCGAACTTGTCGCC 1415434 >seq4482 Length=7360143 Score = 91.5 bits (100), Expect = 6e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 349072 GGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCC 349131 ||||| || |||||| || | || ||| | |||||||| | |||| ||| ||||| || Sbjct 5238897 GGCGTTGATAATCTCTTTAATTCGGGGGACCCCCAGGGTGATGTTCATGGAAGCGACACC 5238956 Query 349132 GGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGG 349186 ||||||||||| |||| |||||||| ||| ||| ||||| || |||| |||| Sbjct 5238957 AGCAAAGTGGAACGTCTTGAGGGTCATCTGTGTGCCAGGCTCCCCTATGCTCTGG 5239011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084607341548562