Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20aleutianus_20[genbank_20GCA_5F001910805.1_202016-12-20] 10,489 sequences; 899,650,391 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq417 174 3e-41 seq695 84.2 3e-14 >seq417 Length=403356 Score = 174 bits (192), Expect = 3e-41 Identities = 194/256 (76%), Gaps = 16/256 (6%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||| |||||||||| |||| | ||||||||||||||||||||||||||||||| || Sbjct 328127 TCAGTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TC 328185 Query 76 AAACTTCCATTGGCTGGAAGCCAATAG----------TCCCTCTAAGAAGCCAGCCACCA 125 || || | |||||| | |||| | | ||||||||||||| | | | Sbjct 328186 AATCT-CGTGTGGCTGAACGCCACTGGACACCACTTGTCCCTCTAAGAAGTTGGACGACG 328244 Query 126 ACCATAGTCGATGGGGC---TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAAC 182 ||| | | | || || |||||| | |||||||| | ||| ||||||||| Sbjct 328245 ACCGCACGGGGCCGCGCAACTAGTTAGCATGCCGGAGTCTCGTTTGATATTGGAATTAAC 328304 Query 183 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAA 242 |||||||||| |||||||| ||||| || |||||||||||||||| | | |||| ||||| Sbjct 328305 CAGACAAATCGCTCCACCATCTAAGTACAGCCATGCACCACCACCTACA-AATCGAGAAA 328363 Query 243 GAGCTATCAATCTGTC 258 ||||||| |||||||| Sbjct 328364 GAGCTATTAATCTGTC 328379 >seq695 Length=307493 Score = 84.2 bits (92), Expect = 3e-14 Identities = 119/164 (73%), Gaps = 14/164 (9%) Strand=Plus/Plus Query 42 ACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCAT-TGGCTGGAAGCCAAT 100 |||| |||||||||||||||||||||||||| ||| || ||| |||||| | ||| Sbjct 106191 ACATTTAAGGGCATCACAGACCTGTTATTGC-TCAGTCT--CATGTGGCTGAACGCC--- 106244 Query 101 AGTCCCTCTAAGAAGCCAGCCACCAACCATA---GTCGATGGGGCTATTTAGCAGGTTAA 157 ||||||||||| | | |||||| | | | | ||| | |||| | | Sbjct 106245 ----CCTCTAAGAAGTCGGATGCCAACCGCACAGGGCCACAAAACTAGTCAGCATGCTTG 106300 Query 158 GGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||| | ||||||||||||||||| |||| |||||||| Sbjct 106301 AGTCTCGTTTGCTATCGGAATTAACCAGATAAATTGCTCCACCA 106344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796719035409