Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20aleutianus_20[genbank_20GCA_5F001910805.1_202016-12-20] 10,489 sequences; 899,650,391 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq417 87.8 3e-15 seq376 75.2 2e-11 >seq417 Length=403356 Score = 87.8 bits (96), Expect = 3e-15 Identities = 59/65 (91%), Gaps = 1/65 (2%) Strand=Plus/Minus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||||||||||||||||||||||||||| | |||| |||||||||| || Sbjct 328190 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCAC 328132 Query 166 ACTGa 170 ||||| Sbjct 328131 ACTGA 328127 >seq376 Length=473460 Score = 75.2 bits (82), Expect = 2e-11 Identities = 58/69 (84%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 ||||| ||| |||||| || |||||||| | ||||| ||| || ||||||| ||||||| Sbjct 449053 CTCTTTAACAAGGAATTCCCAGTAAGCGTGGGTCATAAGCTTGCATTGATTAAGTCCCTG 448994 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 448993 CCCTTTGTA 448985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947100648192