Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20aleutianus_20[genbank_20GCA_5F001910805.1_202016-12-20] 10,489 sequences; 899,650,391 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq8 295 2e-77 >seq8 Length=2021858 Score = 295 bits (326), Expect = 2e-77 Identities = 253/318 (80%), Gaps = 36/318 (11%) Strand=Plus/Plus Query 220 CACTTGCG-CCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCG 278 |||| ||| |||| || |||||||||||||||||||||||| ||| |||||| | | Sbjct 1387082 CACTGGCGGCCGA--CGCCTCCCACTTATTCTACACCTCTCATGTCTCTTCACAGTGCCA 1387139 Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1387140 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCT 1387199 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 |||||||||||||||||||||| |||||||||||||||| | ||| | ||||||||| Sbjct 1387200 TGGCTGTGGTTTCGCTAGATAGCCAGTAGGGACAGTGGGAATATTGTTCAACCATTCATG 1387259 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 |||||||||||||||||| ||||||||||||||| || Sbjct 1387260 TGCGTCACTAATTAGATGAAGAGGCATTTGGCTACTTT---------------------- 1387297 Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT---TCAGAGCACTGGGCAGA 515 |||||| |||||||||||||||||||||| || ||||||| |||||| Sbjct 1387298 --------TGGCGCTTCATTGAATTTCTTCACTTTGACATCGCTCTGAGCACTCGGCAGA 1387349 Query 516 AATCACATTGCGTCAACA 533 |||||||| |||||||| Sbjct 1387350 AATCACATCACGTCAACA 1387367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635028483872