Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20]
166,448 sequences; 681,652,711 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq110713 113 2e-22
seq161770 100 1e-18
seq130687 100 1e-18
seq4144 98.7 4e-18
seq144352 82.4 3e-13
seq62219 82.4 3e-13
seq48995 80.6 1e-12
seq160147 75.2 5e-11
seq150170 75.2 5e-11
seq92248 75.2 5e-11
seq43707 75.2 5e-11
>seq110713
Length=2119
Score = 113 bits (124), Expect = 2e-22
Identities = 91/110 (83%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628
|||||| ||||||| |||||||||||| |||| |||| || ||||||||||||||||
Sbjct 1311 GGACCCAAAAGATGATGAACTATGCCTCGGCAGGGCGAAGTCAAAGGAAACTCTGGTGGA 1370
Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678
||| || |||||| ||| ||||||||||| || || | ||||||||||
Sbjct 1371 GGCCCGTAGCGGTCCTGACGTGCAAATCGGTCTTCCGACCTGGGTATAGG 1420
>seq161770
Length=4038
Score = 100 bits (110), Expect = 1e-18
Identities = 118/159 (74%), Gaps = 2/159 (1%)
Strand=Plus/Plus
Query 41 AGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATA 100
||||| ||||||||||| |||||| | || | | |||||| | | ||||| ||||||||
Sbjct 1835 AGTCGGGTTGTTTGGGATTGCAGCCCAAAGCGAGTGGTAAACTCCATCTAAGGCTAAATA 1894
Query 101 TTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAA 160
||| ||||| |||||| ||||||| | | ||||| ||||||| |||| | |
Sbjct 1895 CCGGCAAGAGATCGATAGTTGACAAGTACCTTTAGGGAAAGCTGAAAAGAACTT--AAGA 1952
Query 161 GAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
||||||| || || ||||||| ||| | ||| || ||
Sbjct 1953 GAGAGTTCAAGAGGGCGTGAAACCGTTTAGAGGTAAACG 1991
>seq130687
Length=3954
Score = 100 bits (110), Expect = 1e-18
Identities = 108/142 (76%), Gaps = 1/142 (1%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||||||||||||||||| | || ||| |||||| | | ||| |||||||
Sbjct 194 GAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTGGGGCTAAAT 135
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATG-AAAAGCACTTTGGA 158
| ||| ||||||||||| ||||||| | | ||||| || ||||| |||||| |
Sbjct 134 ACCGGCACGAGACCGATAGTCAACAAGTACCTTAAGGGAAAGTTGAAAAAGAACTTTGAA 75
Query 159 AAGAGAGTTAAAAAGCACGTGA 180
|||||||| || || |||||
Sbjct 74 GAGAGAGTTCAAGAGGGCGTGA 53
>seq4144
Length=12884
Score = 98.7 bits (108), Expect = 4e-18
Identities = 116/157 (74%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||||||||||||||||| | || || |||||| | | ||||| | |||||
Sbjct 3735 GAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCAGGTGGTAAACTCCATCTAAGGATAAAT 3676
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
|| || |||||||||| |||| || | ||||| ||||||| ||| ||||
Sbjct 3675 ATCAGCACAAGACCGATAGTCGACAATTACCTGAAGGGAAAGTTGAAAAGAACTCTGGAG 3616
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196
|||||||| || || ||||||| |||| ||| ||
Sbjct 3615 AGAGAGTTCAAGAGGGCGTGAAACCTTTGAGAGGTAA 3579
>seq144352
Length=5910
Score = 82.4 bits (90), Expect = 3e-13
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||||||||||||||||| | | ||| |||||| | | ||||| |||||||
Sbjct 5643 GAGTCGGGTTGTTTGGGAATGCAGCCCAAGGCGGGCGGTAAACTCCATCTAAGGCTAAAT 5584
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAG 149
| ||| ||||||||||| ||| ||| | | ||||| |||||||
Sbjct 5583 ACCGGCATGAGACCGATAGACGACATGTACCTTAAGGGAAAGTTGAAAAG 5534
>seq62219
Length=13881
Score = 82.4 bits (90), Expect = 3e-13
Identities = 83/105 (79%), Gaps = 6/105 (6%)
Strand=Plus/Minus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG---T 461
|| ||||||||| |||||||||||||||||||||| | |||||||| |||||
Sbjct 11680 CGACCCGTCTTGAAACACGGACCAAGGAGTCTAACGTGCATGCGAGTCAGAGGGTGCAAG 11621
Query 462 CAAACCCGTG-CGCGTAATGAAAGTGAACG--GAGGTGGGAACCC 503
|||| || || ||| ||||||||||| | |||||||||||||
Sbjct 11620 CAAAACCCTGTTGCGCAATGAAAGTGAGGGTTGAGGTGGGAACCC 11576
>seq48995
Length=9195
Score = 80.6 bits (88), Expect = 1e-12
Identities = 88/116 (76%), Gaps = 2/116 (2%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||||||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 3535 GAGTCGGGTTGTTTGGGAATGCAGCCCGAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 3476
Query 100 ATTGGCCAGAGACCGATAGCG--CACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153
| ||| | |||||| || | ||||||| | | ||||| ||||||| |||
Sbjct 3475 ACCGGCACGGGACCGAGAGAGTCGACAAGTACCTTAAGGGAAAGTTGAAAAGAACT 3420
>seq160147
Length=1631
Score = 75.2 bits (82), Expect = 5e-11
Identities = 65/81 (80%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467
||||||||| ||||||||||||||||||||||| ||||||| ||||| |||||
Sbjct 231 CCCGTCTTGAAACACGGACCAAGGAGTCTAACACACGTGCGAGTCAAAGGGTGCAAAACC 172
Query 468 CGTGCGCGTAATGAAAGTGAA 488
| ||| ||||||||||||
Sbjct 171 CCCAGGCGCAATGAAAGTGAA 151
>seq150170
Length=459
Score = 75.2 bits (82), Expect = 5e-11
Identities = 64/79 (81%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||||||||||||||||| | | ||| |||||| | | ||||| |||||||
Sbjct 81 GAGTCGGGTTGTTTGGGAATGCAGCCCAGAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 22
Query 100 ATTGGCCAGAGACCGATAG 118
| ||| |||||||||||
Sbjct 21 ACCGGCACGAGACCGATAG 3
>seq92248
Length=5489
Score = 75.2 bits (82), Expect = 5e-11
Identities = 68/86 (79%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 43 TCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATT 102
||| |||||||||||||||||| | || || |||||| | | ||||| ||||||||
Sbjct 3623 TCGGGTTGTTTGGGAATGCAGCCCAAAGCTGGTGGTAAACTCCATCTAAGGCTAAATACC 3564
Query 103 GGCCAGAGACCGATAGCGCACAAGTA 128
||| ||||||||||| |||||||
Sbjct 3563 GGCATGAGACCGATAGTCGACAAGTA 3538
>seq43707
Length=5432
Score = 75.2 bits (82), Expect = 5e-11
Identities = 96/134 (72%), Gaps = 10/134 (7%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
||| || |||||||||||||||||| | || ||| ||| || | | ||||| ||||
Sbjct 4533 GAGACGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGGTTAACTCCATCTAAGGCTAC-- 4590
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
||||||||||| ||||||| | | ||||| ||||||| |||||| |
Sbjct 4591 --------GAGACCGATAGTCAACAAGTACCTTAAGGGAAAGCTGAAAAGAACTTTGAAG 4642
Query 160 AGAGAGTTAAAAAG 173
|||||||| || ||
Sbjct 4643 AGAGAGTTCAAGAG 4656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2076429690400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |