Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20]
166,448 sequences; 681,652,711 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq121100 275 1e-71
seq21963 217 3e-54
seq161985 197 2e-48
seq128013 181 2e-43
seq39442 152 9e-35
seq34459 122 1e-25
seq147944 107 3e-21
seq151136 91.5 3e-16
seq31993 89.7 9e-16
seq17604 82.4 1e-13
seq150357 78.8 2e-12
>seq121100
Length=1111
Score = 275 bits (304), Expect = 1e-71
Identities = 211/250 (84%), Gaps = 0/250 (0%)
Strand=Plus/Minus
Query 45 AAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACA 104
|||| ||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 804 AAACCAACCTGTCTCACGACGGTCTAAGCCCAGCTCACGTTCCCTATTAGTAGGTGAACA 745
Query 105 ATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAA 164
|||||||||| | |||||||||| |||||||||||||||||| |||||||| | |
Sbjct 744 ATCCAACGCTAGGTGGATTCTGCTTCACAATGATAGGAAGAGCCGACGTCGAAGGAACGA 685
Query 165 AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 684 AAAGCGCCGTCGTTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 625
Query 225 CTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGG 284
||| || ||| || | ||| | | | | | | |||| ||||| |||||||||||
Sbjct 624 CTGACATCTCCTGCTTAAAACCCCAAAAGTCAGATGTATCGTGAGGCCCCACTTTCATGG 565
Query 285 TTTGTATTCA 294
| ||||||||
Sbjct 564 TCTGTATTCA 555
>seq21963
Length=4541
Score = 217 bits (240), Expect = 3e-54
Identities = 147/165 (89%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
||||||||||||||||||||| |||||||| |||||||||||| |||||| |||||| |
Sbjct 3354 TCATCAGTAGGGTAAAACTAAACTGTCTCACGACGGTCTAAACTTAGCTCAAGTTCCCCA 3295
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||||||||||||||||||||||||| ||||||||||||| ||| ||| |||||||||
Sbjct 3294 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCGCAATGGTAGAAAGAGCCGA 3235
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCC 195
|||| | |||||||||||| ||||| ||||||||||||||| |||
Sbjct 3234 CATCTATGGATCAAAAAGCGACGTCACTATGAACGCTTGGCCGCC 3190
>seq161985
Length=6690
Score = 197 bits (218), Expect = 2e-48
Identities = 158/189 (84%), Gaps = 1/189 (1%)
Strand=Plus/Plus
Query 46 AACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAA 105
||| |||| |||||| | ||||||| ||| ||||||| ||||||||||||| ||||||
Sbjct 1313 AACGAACCCGTCTCACGGCGGTCTACACC-AGCTCACCTTCCCTATTAGTGTATGAACAG 1371
Query 106 TCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAA 165
||||||||| |||||||||| | ||||| ||||||||||||||||||||||| |
Sbjct 1372 TCCAACGCTCGGTGAATTCTGCTCCACGATGATCGGAAGAGCCGACATCGAAGGATCGAT 1431
Query 166 AAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTC 225
||| |||||||||||| |||| || ||||||||||||||||||| | ||||||| |||
Sbjct 1432 AAGGGACGTCGCTATGACTGCTTTGCCGCCACAAGCCAGTTATCCCCGCGGTAACTCTTC 1491
Query 226 TGGCACCTC 234
|| ||||||
Sbjct 1492 TGACACCTC 1500
>seq128013
Length=7267
Score = 181 bits (200), Expect = 2e-43
Identities = 122/137 (89%), Gaps = 7/137 (5%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1592 TCATCACTAGGGTAAAACTAATCTGTCTCATGATGGTCTAAACCCAGCTCACGTTCCCTA 1651
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||||||| ||||||||||||| || ||||||||| |||||||||||||||||
Sbjct 1652 TTAGTGGATGAACAATCCAACACT-------TTCTGCTTCACAATGATAGGAAGAGCCGA 1704
Query 151 CATCGAAGGATCAAAAA 167
|||||||||||||||||
Sbjct 1705 CATCGAAGGATCAAAAA 1721
>seq39442
Length=12651
Score = 152 bits (168), Expect = 9e-35
Identities = 104/117 (89%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
||||||||||| |||||||||||||||||| ||||||||| |||||||||| |||| ||
Sbjct 12424 TCATCAGTAGGTTAAAACTAACCTGTCTCACAACGGTCTAATCCCAGCTCACATTCCTTA 12483
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147
||||||||||||||||||||||| | |||||||||||| ||||||||||||||
Sbjct 12484 TTAGTGGGTGAACAATCCAACGCCTGGTGAATTCTGCTTCACAATGATAGGAAGAGC 12540
>seq34459
Length=4034
Score = 122 bits (134), Expect = 1e-25
Identities = 70/72 (97%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 72 TCATCAGTAGGGTAAAACGAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 13
Query 91 TTAGTGGGTGAA 102
||||||||||||
Sbjct 12 TTAGTGGGTGAA 1
>seq147944
Length=2055
Score = 107 bits (118), Expect = 3e-21
Identities = 79/94 (84%), Gaps = 11/94 (12%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct 745 TCATCAGTAGGGTAAAACTAACCAGTCT-----------AAACCCAGCTCACGTTCCCTA 793
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTC 124
||||||||||||||||||||| ||| | ||||||
Sbjct 794 TTAGTGGGTGAACAATCCAACACTTGCTGAATTC 827
>seq151136
Length=600
Score = 91.5 bits (100), Expect = 3e-16
Identities = 86/110 (78%), Gaps = 11/110 (10%)
Strand=Plus/Minus
Query 107 CCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAA--------G 158
|||||||| | |||||||||||| ||||| ||||||||||||||| |
Sbjct 304 CCAACGCTCAGTGAATTCTGCTTCACAGTGATA---AGAGCCGACATCGAANNNNNNNNG 248
Query 159 GATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208
||||||||||| | | | |||||||||||||| ||||||||||||||||
Sbjct 247 GATCAAAAAGCGATGCTGTTATGAACGCTTGGCCGCCACAAGCCAGTTAT 198
>seq31993
Length=12741
Score = 89.7 bits (98), Expect = 9e-16
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 176 GCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234
|||||||||||||||| || ||||||||||||||| |||||||||||||||| ||||||
Sbjct 10273 GCTATGAACGCTTGGCCGCTACAAGCCAGTTATCCTTGTGGTAACTTTTCTGACACCTC 10215
Score = 80.6 bits (88), Expect = 5e-13
Identities = 52/57 (91%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC 87
|||||||||| ||||||||||||||||||| ||| ||| ||||||||||| ||||||
Sbjct 10336 TCATCAGTAGAGTAAAACTAACCTGTCTCACGACAGTCCAAACCCAGCTCGCGTTCC 10280
>seq17604
Length=12674
Score = 82.4 bits (90), Expect = 1e-13
Identities = 135/196 (69%), Gaps = 29/196 (15%)
Strand=Plus/Minus
Query 48 CTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATC 107
|||||||||||||||| ||||||| |||||||||| ||| ||| ||||||||| | |
Sbjct 11032 CTAACCTGTCTCATGATGGTCTAATCCCAGCTCACTTTCTCTACAAGTGGGTGACCTGT- 10974
Query 108 CAACGCTTACCG-------AATTCTGCTTCGGTATGAT-AGGAAGAGCCGACATCGAAGG 159
||| |||| | ||||||||| |||| || || |||| | |||||
Sbjct 10973 CAATGCTTGGTGCTTTGGATTTTCTGCTTCACATTGATAAGAAAAAGCCAAAGCTGAAGG 10914
Query 160 ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGC-CACAAGCCAGTTATCCCTGTGGTA 218
||||||||||| || || ||||||||||||||||||||||||
Sbjct 10913 ATCAAAAAGCA-------------------GCAGCACACAAGCCAGTTATCCCTGTGGTA 10873
Query 219 ACTTTTCTGGCACCTC 234
|| |||| |||||
Sbjct 10872 GCTCTTCTAAAACCTC 10857
>seq150357
Length=2351
Score = 78.8 bits (86), Expect = 2e-12
Identities = 92/123 (75%), Gaps = 1/123 (1%)
Strand=Plus/Plus
Query 173 GTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACC 232
|| |||||| || |||||||| |||||||| |||||||||||||| |||| |||| ||||
Sbjct 506 GTTGCTATGGACACTTGGCTGTCACAAGCCGGTTATCCCTGTGGTGACTTCTCTGACACC 565
Query 233 TCTAGCCTCAAATTTC-GAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTAT 291
|| || | ||| | | | | ||||| | ||| | | |||||| ||| |||||
Sbjct 566 TCCTGCTTAAAAGCCCAAAAAGTCCGAAGGACAGCGAGGTCCCGCTTTCACGGTCTGTAT 625
Query 292 TCA 294
|||
Sbjct 626 TCA 628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 852977868288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |