Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20] 166,448 sequences; 681,652,711 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq121100 275 1e-71 seq21963 217 3e-54 seq161985 197 2e-48 seq128013 181 2e-43 seq39442 152 9e-35 seq34459 122 1e-25 seq147944 107 3e-21 seq151136 91.5 3e-16 seq31993 89.7 9e-16 seq17604 82.4 1e-13 seq150357 78.8 2e-12 >seq121100 Length=1111 Score = 275 bits (304), Expect = 1e-71 Identities = 211/250 (84%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 45 AAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACA 104 |||| ||||||||||| |||||||||| ||||||||||||||||||||||| |||||||| Sbjct 804 AAACCAACCTGTCTCACGACGGTCTAAGCCCAGCTCACGTTCCCTATTAGTAGGTGAACA 745 Query 105 ATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAA 164 |||||||||| | |||||||||| |||||||||||||||||| |||||||| | | Sbjct 744 ATCCAACGCTAGGTGGATTCTGCTTCACAATGATAGGAAGAGCCGACGTCGAAGGAACGA 685 Query 165 AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 684 AAAGCGCCGTCGTTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 625 Query 225 CTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGG 284 ||| || ||| || | ||| | | | | | | |||| ||||| ||||||||||| Sbjct 624 CTGACATCTCCTGCTTAAAACCCCAAAAGTCAGATGTATCGTGAGGCCCCACTTTCATGG 565 Query 285 TTTGTATTCA 294 | |||||||| Sbjct 564 TCTGTATTCA 555 >seq21963 Length=4541 Score = 217 bits (240), Expect = 3e-54 Identities = 147/165 (89%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||||||||||| |||||||| |||||||||||| |||||| |||||| | Sbjct 3354 TCATCAGTAGGGTAAAACTAAACTGTCTCACGACGGTCTAAACTTAGCTCAAGTTCCCCA 3295 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| ||||||||||||| ||| ||| ||||||||| Sbjct 3294 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCGCAATGGTAGAAAGAGCCGA 3235 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCC 195 |||| | |||||||||||| ||||| ||||||||||||||| ||| Sbjct 3234 CATCTATGGATCAAAAAGCGACGTCACTATGAACGCTTGGCCGCC 3190 >seq161985 Length=6690 Score = 197 bits (218), Expect = 2e-48 Identities = 158/189 (84%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 46 AACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAA 105 ||| |||| |||||| | ||||||| ||| ||||||| ||||||||||||| |||||| Sbjct 1313 AACGAACCCGTCTCACGGCGGTCTACACC-AGCTCACCTTCCCTATTAGTGTATGAACAG 1371 Query 106 TCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAA 165 ||||||||| |||||||||| | ||||| ||||||||||||||||||||||| | Sbjct 1372 TCCAACGCTCGGTGAATTCTGCTCCACGATGATCGGAAGAGCCGACATCGAAGGATCGAT 1431 Query 166 AAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTC 225 ||| |||||||||||| |||| || ||||||||||||||||||| | ||||||| ||| Sbjct 1432 AAGGGACGTCGCTATGACTGCTTTGCCGCCACAAGCCAGTTATCCCCGCGGTAACTCTTC 1491 Query 226 TGGCACCTC 234 || |||||| Sbjct 1492 TGACACCTC 1500 >seq128013 Length=7267 Score = 181 bits (200), Expect = 2e-43 Identities = 122/137 (89%), Gaps = 7/137 (5%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct 1592 TCATCACTAGGGTAAAACTAATCTGTCTCATGATGGTCTAAACCCAGCTCACGTTCCCTA 1651 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||| ||||||||||||| || ||||||||| ||||||||||||||||| Sbjct 1652 TTAGTGGATGAACAATCCAACACT-------TTCTGCTTCACAATGATAGGAAGAGCCGA 1704 Query 151 CATCGAAGGATCAAAAA 167 ||||||||||||||||| Sbjct 1705 CATCGAAGGATCAAAAA 1721 >seq39442 Length=12651 Score = 152 bits (168), Expect = 9e-35 Identities = 104/117 (89%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||| |||||||||||||||||| ||||||||| |||||||||| |||| || Sbjct 12424 TCATCAGTAGGTTAAAACTAACCTGTCTCACAACGGTCTAATCCCAGCTCACATTCCTTA 12483 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147 ||||||||||||||||||||||| | |||||||||||| |||||||||||||| Sbjct 12484 TTAGTGGGTGAACAATCCAACGCCTGGTGAATTCTGCTTCACAATGATAGGAAGAGC 12540 >seq34459 Length=4034 Score = 122 bits (134), Expect = 1e-25 Identities = 70/72 (97%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 72 TCATCAGTAGGGTAAAACGAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 13 Query 91 TTAGTGGGTGAA 102 |||||||||||| Sbjct 12 TTAGTGGGTGAA 1 >seq147944 Length=2055 Score = 107 bits (118), Expect = 3e-21 Identities = 79/94 (84%), Gaps = 11/94 (12%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct 745 TCATCAGTAGGGTAAAACTAACCAGTCT-----------AAACCCAGCTCACGTTCCCTA 793 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTC 124 ||||||||||||||||||||| ||| | |||||| Sbjct 794 TTAGTGGGTGAACAATCCAACACTTGCTGAATTC 827 >seq151136 Length=600 Score = 91.5 bits (100), Expect = 3e-16 Identities = 86/110 (78%), Gaps = 11/110 (10%) Strand=Plus/Minus Query 107 CCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAA--------G 158 |||||||| | |||||||||||| ||||| ||||||||||||||| | Sbjct 304 CCAACGCTCAGTGAATTCTGCTTCACAGTGATA---AGAGCCGACATCGAANNNNNNNNG 248 Query 159 GATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 ||||||||||| | | | |||||||||||||| |||||||||||||||| Sbjct 247 GATCAAAAAGCGATGCTGTTATGAACGCTTGGCCGCCACAAGCCAGTTAT 198 >seq31993 Length=12741 Score = 89.7 bits (98), Expect = 9e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 176 GCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 |||||||||||||||| || ||||||||||||||| |||||||||||||||| |||||| Sbjct 10273 GCTATGAACGCTTGGCCGCTACAAGCCAGTTATCCTTGTGGTAACTTTTCTGACACCTC 10215 Score = 80.6 bits (88), Expect = 5e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC 87 |||||||||| ||||||||||||||||||| ||| ||| ||||||||||| |||||| Sbjct 10336 TCATCAGTAGAGTAAAACTAACCTGTCTCACGACAGTCCAAACCCAGCTCGCGTTCC 10280 >seq17604 Length=12674 Score = 82.4 bits (90), Expect = 1e-13 Identities = 135/196 (69%), Gaps = 29/196 (15%) Strand=Plus/Minus Query 48 CTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATC 107 |||||||||||||||| ||||||| |||||||||| ||| ||| ||||||||| | | Sbjct 11032 CTAACCTGTCTCATGATGGTCTAATCCCAGCTCACTTTCTCTACAAGTGGGTGACCTGT- 10974 Query 108 CAACGCTTACCG-------AATTCTGCTTCGGTATGAT-AGGAAGAGCCGACATCGAAGG 159 ||| |||| | ||||||||| |||| || || |||| | ||||| Sbjct 10973 CAATGCTTGGTGCTTTGGATTTTCTGCTTCACATTGATAAGAAAAAGCCAAAGCTGAAGG 10914 Query 160 ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGC-CACAAGCCAGTTATCCCTGTGGTA 218 ||||||||||| || || |||||||||||||||||||||||| Sbjct 10913 ATCAAAAAGCA-------------------GCAGCACACAAGCCAGTTATCCCTGTGGTA 10873 Query 219 ACTTTTCTGGCACCTC 234 || |||| ||||| Sbjct 10872 GCTCTTCTAAAACCTC 10857 >seq150357 Length=2351 Score = 78.8 bits (86), Expect = 2e-12 Identities = 92/123 (75%), Gaps = 1/123 (1%) Strand=Plus/Plus Query 173 GTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACC 232 || |||||| || |||||||| |||||||| |||||||||||||| |||| |||| |||| Sbjct 506 GTTGCTATGGACACTTGGCTGTCACAAGCCGGTTATCCCTGTGGTGACTTCTCTGACACC 565 Query 233 TCTAGCCTCAAATTTC-GAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTAT 291 || || | ||| | | | | ||||| | ||| | | |||||| ||| ||||| Sbjct 566 TCCTGCTTAAAAGCCCAAAAAGTCCGAAGGACAGCGAGGTCCCGCTTTCACGGTCTGTAT 625 Query 292 TCA 294 ||| Sbjct 626 TCA 628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 852977868288