Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20] 166,448 sequences; 681,652,711 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq31855 188 2e-45 seq56594 114 4e-23 >seq31855 Length=4112 Score = 188 bits (208), Expect = 2e-45 Identities = 174/228 (76%), Gaps = 33/228 (14%) Strand=Plus/Minus Query 309 TCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG 368 ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 890 TCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGCCAGTAGG 831 Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 |||||||||||| | ||| | ||||||||| |||||||||||||||||| |||||||||| Sbjct 830 GACAGTGGGAATATTGTTCAACCATTCATGTGCGTCACTAATTAGATGAAGAGGCATTTG 771 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 488 ||||| || |||||| |||||||||||| Sbjct 770 GCTACTTT------------------------------TGGCGCTTCATTGAATTTCTTC 741 Query 489 ACTTTGACAT---TCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||| || ||| ||| |||||||||||||| |||||||| Sbjct 740 ACTTTGACATCGCTCTGAGGACTCGGCAGAAATCACATCACGTCAACA 693 >seq56594 Length=1365 Score = 114 bits (126), Expect = 4e-23 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| ||||||||| ||||||| |||||||||| Sbjct 1365 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCAGGCGCGTCTTTAATTAGATG 1306 Query 417 ACGAGGCATTTGGCTA 432 |||||||||||||||| Sbjct 1305 ACGAGGCATTTGGCTA 1290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1632478242304