Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sebastes_20minor_20[genbank_20GCA_5F001910765.1_202016-12-20]
166,448 sequences; 681,652,711 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq31855 188 2e-45
seq56594 114 4e-23
>seq31855
Length=4112
Score = 188 bits (208), Expect = 2e-45
Identities = 174/228 (76%), Gaps = 33/228 (14%)
Strand=Plus/Minus
Query 309 TCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG 368
||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 890 TCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGCCAGTAGG 831
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
|||||||||||| | ||| | ||||||||| |||||||||||||||||| ||||||||||
Sbjct 830 GACAGTGGGAATATTGTTCAACCATTCATGTGCGTCACTAATTAGATGAAGAGGCATTTG 771
Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 488
||||| || |||||| ||||||||||||
Sbjct 770 GCTACTTT------------------------------TGGCGCTTCATTGAATTTCTTC 741
Query 489 ACTTTGACAT---TCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||| || ||| ||| |||||||||||||| ||||||||
Sbjct 740 ACTTTGACATCGCTCTGAGGACTCGGCAGAAATCACATCACGTCAACA 693
>seq56594
Length=1365
Score = 114 bits (126), Expect = 4e-23
Identities = 71/76 (93%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||||||||||||||| ||||||||| ||||||| ||||||||||
Sbjct 1365 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCAGGCGCGTCTTTAATTAGATG 1306
Query 417 ACGAGGCATTTGGCTA 432
||||||||||||||||
Sbjct 1305 ACGAGGCATTTGGCTA 1290
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1632478242304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |