Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sebastes_20nigrocinctus_20[genbank_20GCA_5F000475235.2_202016-12-20] 15,872 sequences; 746,044,620 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq6722 96.9 2e-18 seq365 93.3 2e-17 seq8401 86.0 3e-15 seq3756 86.0 3e-15 seq1060 86.0 3e-15 seq172 86.0 3e-15 seq1485 84.2 1e-14 seq10449 82.4 4e-14 seq4239 82.4 4e-14 seq3039 82.4 4e-14 seq762 82.4 4e-14 seq13024 80.6 1e-13 seq11553 80.6 1e-13 seq4999 80.6 1e-13 seq452 80.6 1e-13 seq896 78.8 4e-13 seq6557 77.0 1e-12 seq5501 77.0 1e-12 seq4772 77.0 1e-12 seq3044 77.0 1e-12 seq1722 77.0 1e-12 seq1553 77.0 1e-12 seq984 77.0 1e-12 seq31 77.0 1e-12 seq3089 75.2 5e-12 seq2626 75.2 5e-12 seq271 75.2 5e-12 seq9285 73.4 2e-11 seq242 73.4 2e-11 seq2779 71.6 6e-11 >seq6722 Length=25064 Score = 96.9 bits (106), Expect = 2e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||| Sbjct 10847 GGAAAAGAAACTAACCAGGATTCCCTCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGCG 10906 Query 61 C 61 | Sbjct 10907 C 10907 >seq365 Length=255688 Score = 93.3 bits (102), Expect = 2e-17 Identities = 74/88 (84%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCC 75 |||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||| || Sbjct 181692 CAGGATTCCCTCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGCGCCGAATCCCCGTCCG 181633 Query 76 GCGG-TGGGGCGCGGGACATGTGGCGTA 102 ||| || | || | |||||||||| Sbjct 181632 ACGGACGGATTGGGGAAAATGTGGCGTA 181605 Score = 71.6 bits (78), Expect = 6e-11 Identities = 50/56 (89%), Gaps = 1/56 (2%) Strand=Plus/Minus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCG 71 ||||||||| |||||| ||||||| ||| |||||||||||||||| |||||| ||| Sbjct 253290 CAGGATTCC-TCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGCGTCGAATCGCCG 253236 >seq8401 Length=21197 Score = 86.0 bits (94), Expect = 3e-15 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCC 75 || ||||||||||||| ||| || |||| ||||||||||||||| ||||||||||| || Sbjct 18870 CAAGATTCCCTCAGTAGCGGAGATTGAAGAGGGAAGAGCCCAGCACCGAATCCCCGTCCG 18811 Query 76 GCGGTGGGGCGCGGGACATGTGGCGTA 102 ||| || |||| |||||||||| Sbjct 18810 ACGGGCGGATTGGGGAAATGTGGCGTA 18784 >seq3756 Length=58040 Score = 86.0 bits (94), Expect = 3e-15 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCC 75 |||||||||||||||| ||||||| ||| |||||||||||||||| |||||| ||| || Sbjct 20871 CAGGATTCCCTCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGCGACGAATCGCCGTCCG 20930 Query 76 GCGGTGGGGCGCGGGACATGTGGCGTA 102 ||| || |||| | |||||||| Sbjct 20931 CCGGGCGGAGTGGGGAAACGTGGCGTA 20957 >seq1060 Length=157885 Score = 86.0 bits (94), Expect = 3e-15 Identities = 55/59 (93%), Gaps = 1/59 (2%) Strand=Plus/Minus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCC 74 ||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||| || Sbjct 142828 CAGGATTCC-TCAGTAGCGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCGCCGTCC 142771 >seq172 Length=341299 Score = 86.0 bits (94), Expect = 3e-15 Identities = 74/88 (84%), Gaps = 3/88 (3%) Strand=Plus/Minus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCC 75 ||||||||| |||||| ||||||| || ||||||||||||||||||||||||||| || Sbjct 318263 CAGGATTCC-TCAGTAGCGGCGAGCAAAGAGGGAAGAGCCCAGCGCCGAATCCCCGTCCA 318205 Query 76 GCGGTGGGGCGCGGG-ACATGTGGCGTA 102 ||| | || | ||| | |||||||||| Sbjct 318204 ACGG-GCGGAGTGGGTAAATGTGGCGTA 318178 >seq1485 Length=133305 Score = 84.2 bits (92), Expect = 1e-14 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 17 AGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCG 76 ||||||||||||||| ||||||| ||| |||||||||||| |||||||||| | | || Sbjct 94917 AGGATTCCCTCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCGGCGCCGAATCGCAGTCCGA 94858 Query 77 CGGTGGGGCGCGGGACATGTGGCGTA 102 ||| || |||| |||||||||| Sbjct 94857 CGGGCGGAGTGGGGAAATGTGGCGTA 94832 Score = 75.2 bits (82), Expect = 5e-12 Identities = 71/88 (81%), Gaps = 2/88 (2%) Strand=Plus/Minus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCC 75 |||||||||||||||| | | ||| ||| |||||||||||| |||| ||||| ||| || Sbjct 121957 CAGGATTCCCTCAGTAGCAGTGAGCGAAGAGGGAAGAGCCCGGCGCAGAATCGCCGTCCG 121898 Query 76 GC-GGTGGGGCGCGGGACATGTGGCGTA 102 | || || | | |||| |||||||||| Sbjct 121897 ACAGGCGGAGTG-GGGAAATGTGGCGTA 121871 >seq10449 Length=6959 Score = 82.4 bits (90), Expect = 4e-14 Identities = 50/52 (96%), Gaps = 1/52 (2%) Strand=Plus/Minus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATC 67 ||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct 2782 CAGGATTCC-TCAGTAGCGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATC 2732 >seq4239 Length=48406 Score = 82.4 bits (90), Expect = 4e-14 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 20 ATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGG 79 |||||||||||| || ||| ||| ||||||||||||||||||||||||||| || ||| Sbjct 45405 ATTCCCTCAGTAGCGCGGAGCGAAAAGGGAAGAGCCCAGCGCCGAATCCCCGTCCGACGG 45346 Query 80 TGGGGCGCGGGACATGTGGCGTA 102 || |||| |||||||||| Sbjct 45345 GCGGATTGGGGAAATGTGGCGTA 45323 >seq3039 Length=76524 Score = 82.4 bits (90), Expect = 4e-14 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 20 ATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGG 79 |||||||||||| || |||| ||| |||||||||||||||||||||||||| || ||| Sbjct 33042 ATTCCCTCAGTAGCGTCGAGCGAAGAGGGAAGAGCCCAGCGCCGAATCCCCATCCGACGG 33101 Query 80 TGGGGCGCGGGACATGTGGCGTA 102 || |||| |||||||||| Sbjct 33102 GCGGTTTGGGGAAATGTGGCGTA 33124 >seq762 Length=184429 Score = 82.4 bits (90), Expect = 4e-14 Identities = 71/87 (82%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCC 75 ||||||||| |||||| ||||||| ||| ||||||||||||||||||||||| ||| | Sbjct 41565 CAGGATTCC-TCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGCGCCGAATCGCCGTCTG 41623 Query 76 GCGGTGGGGCGCGGGACATGTGGCGTA 102 ||| || | |||| ||||||| || Sbjct 41624 ACGGGCGGAGGGGGGAAATGTGGCCTA 41650 >seq13024 Length=2561 Score = 80.6 bits (88), Expect = 1e-13 Identities = 68/84 (81%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCC 75 |||||||||||||||| |||| || ||| |||||| |||||||||||||||| ||| || Sbjct 2365 CAGGATTCCCTCAGTAGCGGCTAGCGAAGAGGGAAAAGCCCAGCGCCGAATCACCGTCCG 2306 Query 76 GCGGTGGGGCGCGGGACATGTGGC 99 ||| || |||| ||||||| Sbjct 2305 ACGGGCGGATTGGGGAAATGTGGC 2282 >seq11553 Length=7588 Score = 80.6 bits (88), Expect = 1e-13 Identities = 70/87 (80%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCC 75 |||||||||||||||| ||||||| ||| |||||| |||||||||| ||||| ||| || Sbjct 1661 CAGGATTCCCTCAGTAGCGGCGAGCGAAAAGGGAAAAGCCCAGCGCTGAATCGCCGTCCA 1720 Query 76 GCGGTGGGGCGCGGGACATGTGGCGTA 102 ||| || |||| | |||||||| Sbjct 1721 ACGGGCGGAGTAGGGAAAAGTGGCGTA 1747 >seq4999 Length=44142 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCC 74 |||||||||||||||| ||||||| || ||||||||||||||||||||||| ||| || Sbjct 31224 CAGGATTCCCTCAGTAGCGGCGAGCAAAGAGGGAAGAGCCCAGCGCCGAATCACCGTCC 31282 >seq452 Length=217474 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCC 74 |||||||||||||||| ||| ||| ||| ||||||||||||||||||||||| ||| || Sbjct 203372 CAGGATTCCCTCAGTAGCGGTGAGCGAAGAGGGAAGAGCCCAGCGCCGAATCGCCGTCC 203430 >seq896 Length=181829 Score = 78.8 bits (86), Expect = 4e-13 Identities = 70/85 (82%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCC 75 |||||||||||||||| |||| || ||| ||||||||||||||||| ||||| ||| || Sbjct 115175 CAGGATTCCCTCAGTAGCGGCAAGCGAAGAGGGAAGAGCCCAGCGCTGAATCGCCGTCCG 115234 Query 76 GC-GGTGGGGCGCGGGACATGTGGC 99 | ||||| | |||| ||||||| Sbjct 115235 ACTGGTGGATTG-GGGAAATGTGGC 115258 >seq6557 Length=30831 Score = 77.0 bits (84), Expect = 1e-12 Identities = 70/87 (80%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCC 75 ||||||||| |||||| ||||||| ||| ||||||||||||| ||||||||| ||| || Sbjct 26449 CAGGATTCC-TCAGTAGCGGCGAGCGAAAAGGGAAGAGCCCAACGCCGAATCGCCGTCCG 26507 Query 76 GCGGTGGGGCGCGGGACATGTGGCGTA 102 | | || |||| |||||||||| Sbjct 26508 ACAGGCGGATTGGGGAAATGTGGCGTA 26534 >seq5501 Length=33358 Score = 77.0 bits (84), Expect = 1e-12 Identities = 70/87 (80%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCC 75 ||||||||| |||||| ||||||| ||| |||||||||||||||||| |||| ||| || Sbjct 31222 CAGGATTCC-TCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGCGCCAAATCGCCGTCCG 31164 Query 76 GCGGTGGGGCGCGGGACATGTGGCGTA 102 ||| || |||| |||||| ||| Sbjct 31163 ACGGGCGGAGTAGGGAAATGTGGTGTA 31137 >seq4772 Length=47082 Score = 77.0 bits (84), Expect = 1e-12 Identities = 69/87 (79%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCC 75 |||||||||||||| | |||||| ||| |||||||||||||| || ||||| ||| || Sbjct 3389 CAGGATTCCCTCAGAAGTGGCGAGCGAAGAGGGAAGAGCCCAGTGCGGAATCGCCGTCCG 3330 Query 76 GCGGTGGGGCGCGGGACATGTGGCGTA 102 ||| || |||| |||||||||| Sbjct 3329 ACGGGCGGATTGGGGAAATGTGGCGTA 3303 >seq3044 Length=73999 Score = 77.0 bits (84), Expect = 1e-12 Identities = 48/52 (92%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATC 67 ||||||||| |||||| |||||| |||| ||||||||||||||||||||||| Sbjct 70543 CAGGATTCCTTCAGTAGCGGCGATTGAAGAGGGAAGAGCCCAGCGCCGAATC 70492 >seq1722 Length=121708 Score = 77.0 bits (84), Expect = 1e-12 Identities = 48/52 (92%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATC 67 ||||||||| |||||| ||||||| ||| ||||||||||||||||||||||| Sbjct 106959 CAGGATTCCTTCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGCGCCGAATC 107010 >seq1553 Length=124625 Score = 77.0 bits (84), Expect = 1e-12 Identities = 48/52 (92%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATC 67 |||||||||||||||| ||||||| ||| |||||||||||||| |||||||| Sbjct 114265 CAGGATTCCCTCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGTGCCGAATC 114316 >seq984 Length=177687 Score = 77.0 bits (84), Expect = 1e-12 Identities = 50/55 (91%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCC 70 |||||||||||||||| ||||||| ||| |||||||||||||||| |||||| || Sbjct 109992 CAGGATTCCCTCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGCGTCGAATCGCC 109938 Score = 77.0 bits (84), Expect = 1e-12 Identities = 50/55 (91%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCC 70 |||||||||||||||| ||||||| ||| |||||||||||||||| |||||| || Sbjct 111723 CAGGATTCCCTCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGCGTCGAATCGCC 111669 >seq31 Length=578068 Score = 77.0 bits (84), Expect = 1e-12 Identities = 48/52 (92%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 20 ATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCG 71 |||||||||||| ||||||| ||| ||||||||||||||||||||||| ||| Sbjct 339930 ATTCCCTCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGCGCCGAATCGCCG 339879 >seq3089 Length=69777 Score = 75.2 bits (82), Expect = 5e-12 Identities = 67/85 (79%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCC 75 ||||||||| |||||| ||||||| || |||||||||||| ||| |||||| ||| || Sbjct 66106 CAGGATTCCTTCAGTAGCGGCGAGCRAAGAGGGAAGAGCCCGGCGTCGAATCGCCGTCCG 66047 Query 76 GCGGTGGGGCGCGGGACATGTGGCG 100 ||| || |||| |||||||| Sbjct 66046 ACGGGCGGAGTGGGGAAATGTGGCG 66022 >seq2626 Length=82208 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCC 74 |||||||||||||||| ||||| ||| ||||||||||||||||||||||| ||| || Sbjct 67394 CAGGATTCCCTCAGTAGTGGCGAACGAAGAGGGAAGAGCCCAGCGCCGAATCGCCGTCC 67452 >seq271 Length=275435 Score = 75.2 bits (82), Expect = 5e-12 Identities = 50/56 (89%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCG 71 |||||||||||||||| ||||||| ||| ||||||||||||||| |||||| ||| Sbjct 140707 CAGGATTCCCTCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGCAACGAATCGCCG 140652 >seq9285 Length=13331 Score = 73.4 bits (80), Expect = 2e-11 Identities = 69/87 (79%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCC 75 ||||||||| |||||| | ||||| ||| ||||| ||||||||||||||||| || || Sbjct 7888 CAGGATTCC-TCAGTAGCAGCGAGCGAAGAGGGAGGAGCCCAGCGCCGAATCAGCGTCCG 7946 Query 76 GCGGTGGGGCGCGGGACATGTGGCGTA 102 ||| || |||| |||||||||| Sbjct 7947 ACGGGTGGATTGGGGAAATGTGGCGTA 7973 >seq242 Length=321867 Score = 73.4 bits (80), Expect = 2e-11 Identities = 69/87 (79%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCC 75 |||||||| |||||| ||||||| ||| ||||||||||||||||| ||||| ||| || Sbjct 155859 CAGGATTCG-TCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGCGCTGAATCGCCGTCCG 155917 Query 76 GCGGTGGGGCGCGGGACATGTGGCGTA 102 | | || |||| |||||||||| Sbjct 155918 ACAGGCGGATTGGGGAAATGTGGCGTA 155944 >seq2779 Length=80849 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 16 CAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCC 74 ||||||||||||| || ||||||| ||| ||| ||||||| ||||||||||| ||| || Sbjct 56499 CAGGATTCCCTCATTAGCGGCGAGCGAAGAGGAAAGAGCCTAGCGCCGAATCGCCGTCC 56441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230365716480