Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq272 302 9e-80 >seq272 Length=50737 Score = 302 bits (334), Expect = 9e-80 Identities = 269/329 (82%), Gaps = 7/329 (2%) Strand=Plus/Plus Query 10 CAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTC 69 || ||| |||||||||| |||||| || ||| |||| |||||||||||| | | Sbjct 33836 CAAGGGAGTGAAATAGATCCTGAAACCATACGCTTACA-GCGGTCGGAGCCCTTT-AGGG 33893 Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129 ||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||| Sbjct 33894 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAC-CGTTTCCAGCAAGGTTAAG 33952 Query 130 GGCTTCAGGCCCGTT-AGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-AGTTGGTGG 187 ||||| | || ||||| || ||||||||| || || |||||| | ||||||| | Sbjct 33953 CAGTTCAG--CTGTGGAGCCGTAGCGAAAGCGAGTCTGAATAGGGCGCCATAGTTGGTAG 34010 Query 188 CGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGA 247 | ||||||||||||| |||||||||||| | ||||||||||| | |||||| | | Sbjct 34011 TGGTAGACGCGAAACCGTGTGATCTACCCTTGGGCAGGTTGAAGCTGTGGTAACACATAG 34070 Query 248 TGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAA 307 |||||||||||||| || |||||||||||| || ||||||| | |||||||||||||| Sbjct 34071 TGGAGGACCGAACCCGTTGACGTTGAAAAGTCTTGGGATGACCTGAGGGTAGGGGTGAAA 34130 Query 308 GGCCAATCAAACTGGGAAATAGCTCGTAC 336 ||||||||||||| ||||||||||||||| Sbjct 34131 GGCCAATCAAACTCGGAAATAGCTCGTAC 34159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972796264448