Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq272 217 4e-54 >seq272 Length=50737 Score = 217 bits (240), Expect = 4e-54 Identities = 260/350 (74%), Gaps = 5/350 (1%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| | ||||||| || |||||||| |||||||||||||||||||||||| ||||| | Sbjct 31694 TACCGTATGAATAAGGAC-GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTCC 31752 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 ||||||| |||||| | |||| ||||| || || |||||| |||| ||| || Sbjct 31753 GAGCGTTATCCGGAATCATTGGGTTTAAAGGGTCCGTAGGCGGAATAATAAGTCAGTGGT 31812 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 |||| | ||||||| ||||||| ||| |||| || |||| | || Sbjct 31813 GAAAGTCTGCAGCTTAACTGTAGAATTGCCATTGATACTGTTGTTCTTGAGTCATTATGA 31872 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 | || |||||| ||||||| ||||||||| ||||||| ||||||| || | Sbjct 31873 AGTGGTTGGAATGTGTAGTGTAGCGGTGAAATGCATAGATATTACACAGAACACCTATTG 31932 Query 243 CGAAGGCAGCCCCCTGGGATAA--CACTGACGCTCATGCACGAAAGCGTGGGGAGCAAAC 300 ||||||||| | || |||| ||||||||| ||| |||||||||| || ||| ||| Sbjct 31933 CGAAGGCAGATCACT--AATAATGTACTGACGCTGATGGACGAAAGCGTAGGTAGCGAAC 31990 Query 301 AGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGT 350 |||||||||||||||||||||| ||||| |||||||| ||||| ||| Sbjct 31991 AGGATTAGATACCCTGGTAGTCTACGCCGTAAACGATGGTTACTAGCTGT 32040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289595047936