Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq272 116 5e-24 >seq272 Length=50737 Score = 116 bits (128), Expect = 5e-24 Identities = 176/248 (71%), Gaps = 23/248 (9%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| |||||| |||| ||||| || ||||| || ||| | | | ||| Sbjct 35129 CTTAACCTTCCAGCACCGG-CAGGTGTCAGGCCCTATACGTCATCTTTCGAT--TAGCAG 35073 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | |||||||||| | ||||||||||| | ||| ||| ||||| || || Sbjct 35072 AGCCCTGTGTTTTGA-TAAACAGTCGCCTGGATCTTTTCACTGCGGCCCCC--------- 35023 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 || | | || | ||| ||||||||||||||||||||| | |||||||| | Sbjct 35022 -CATGAC-------AG--GGGGCGACCCTTCTCCCGAAGTTACGGGCCAATTTTGCCTAG 34973 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||| ||| || | ||| | |||||| |||||| || || |||||||||||| Sbjct 34972 TTCCTTAGCCATGAATCTCTCGAGCACCTTAGAATTCTCATCCCAACTACCTGTGTCGGT 34913 Query 241 TTACGGTA 248 ||| |||| Sbjct 34912 TTAGGGTA 34905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694397416832