Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq272 248 2e-63 >seq272 Length=50737 Score = 248 bits (274), Expect = 2e-63 Identities = 320/431 (74%), Gaps = 37/431 (9%) Strand=Plus/Minus Query 2 GCGGATACACTGCATCTTCACAGCGATTTCAATTTCA-CTGAGTCTCG-GGTGGAGACAG 59 |||| || | |||||||||| | | | |||||||| | ||| ||| || ||||||| Sbjct 35322 GCGGGTAATCGGCATCTTCACCGATACTACAATTTCAACCGAG-CTCATGGCTGAGACAG 35264 Query 60 CGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTAC 119 | |||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct 35263 TATCCAGATCGTTGCACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTAC 35204 Query 120 CTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTC-GATCAAGAGCTTCGCGT 178 |||||||||||||| |||||||||||||||||| |||||||| | |||| ||||||| Sbjct 35203 CTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAGTTCAA-TGCTTCGCCG 35145 Query 179 TAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238 ||||||| | | |||||||||| ||||| |||||| |||| ||||||||||| | Sbjct 35144 AAGCTAACATCTCCCCTTAACCTTCCAGCACC-GGCAGGTGTCAGGCCCTATACGTCATC 35086 Query 239 TTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGA 298 ||||| || |||||| ||||| |||| |||||||||| |||||| ||||| Sbjct 35085 TTTCG-ATTAGCAGAGCCCTGTG-TTTTGATAAACAGTC------GCCTGG-ATCTT--- 35038 Query 299 CCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCAC---CGGCGCACCTTCTCCCGAAG 355 | || | | | | | || | || |||| ||||||||||||| Sbjct 35037 ----------TTCACTGCG---GCC---CCCCATGACAGGGGGCGACCCTTCTCCCGAAG 34994 Query 356 TTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415 |||||| | |||||||||||||||| || |||||| ||| |||| | |||||| Sbjct 34993 TTACGGGCCAATTTTGCCTAGTTCCTTAGCCATGAATCTCTCGAGCACCTTAGAATTCTC 34934 Query 416 TACCCAACCAC 426 |||||| || Sbjct 34933 ATCCCAACTAC 34923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260795158528