Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq272 425 2e-116 >seq272 Length=50737 Score = 425 bits (470), Expect = 2e-116 Identities = 403/502 (80%), Gaps = 17/502 (3%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 32099 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 32158 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCC--TCTGACCCC 118 |||||||||||||| | |||||| ||||||||||| ||| | || | |||||| Sbjct 32159 GTGGTTTAATTCGATGATACGCGAGGAACCTTACCAGGGCTT-AAATGCAGTCTGACAGG 32217 Query 119 TCTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTC 178 ||| || | ||| ||| |||| ||||||| || ||||| ||||||||||||||| Sbjct 32218 TCTGGAAACAGACTTTT---CTTC---GGACAGATTGCAAGGTGCTGCATGGTTGTCGTC 32271 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 |||||||| |||||| ||| |||||||||| |||||||||||||| | | |||||| Sbjct 32272 AGCTCGTGCCGTGAGGTGTCAGGTTAAGTCCTATAACGAGCGCAACCCCTGTGGTTAGTT 32331 Query 239 GCCATC--ATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCG-GAGGAAGGTG 295 |||| | | | || ||| |||||| ||||||||||| ||||||| |||||||||| Sbjct 32332 GCCAGCGAGTCATGTCGGGAACTCTAGCCAGACTGCCGGTG-CAAACCGCGAGGAAGGTG 32390 Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 |||| |||||||| |||||||| |||||| || ||||||||||||||||||||||| Sbjct 32391 GGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGG-T 32449 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCG 415 | ||| |||||||| | |||||||| | || ||| | ||| || ||||||| Sbjct 32450 AGGACAGAGGGCAGC-TACCCGCGAGGGGATGCGAAT-CTTCAAACCCTATCACAGTTCG 32507 Query 416 GATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CA 474 ||| | |||||||||||||||| |||||||||||||||||||||||| | ||||| || Sbjct 32508 GATCGCAGTCTGCAACTCGACTGCGTGAAGCTGGAATCGCTAGTAATCGCATATCAGCCA 32567 Query 475 TGCTACGGTGAATACGTTCCCG 496 || | ||||||||||||||||| Sbjct 32568 TGATGCGGTGAATACGTTCCCG 32589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503994224640