Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq272 354 3e-95 >seq272 Length=50737 Score = 354 bits (392), Expect = 3e-95 Identities = 358/459 (78%), Gaps = 20/459 (4%) Strand=Plus/Minus Query 136 CGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCA 195 ||||||||||||||||||||||||||| || |||||| | |||||||||||||||||| Sbjct 34185 CGCTGCACCTAAATGCATTTCGGGGAGTACGAGCTATTTCCGAGTTTGATTGGCCTTTCA 34126 Query 196 CCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGG 255 |||||| || ||||||||||| | |||||||| | | |||||||||||||||| | Sbjct 34125 CCCCTACCCTCAGGTCATCCCAAGACTTTTCAACGTCAACGGGTTCGGTCCTCCACTATG 34066 Query 256 TCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGC 315 | ||||| ||||||||||||||| || |||||||| | |||| |||| | | Sbjct 34065 TGTTACCACAGCTTCAACCTGCCCAAGGGTAGATCACACGGTTTCGCGTCTACCACTACC 34006 Query 316 CACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCAC---ACGGGTTAACC 372 ||| |||||||||| |||||||||||||||||||| | | | || | |||||| Sbjct 34005 AACTATGGCGCCCTATTCAGACTCGCTTTCGCTACGGCTCCACAGCTGAACTGCTTAACC 33946 Query 373 TCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACC 432 | || | |||| |||||| ||||||||| | ||||||||||||||||||| || Sbjct 33945 TTGCTGGA-AACGGTAACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACC----CCC 33891 Query 433 TAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCC 492 |||| | |||||||| | |||| || ||||||||||| |||||||||||| Sbjct 33890 TAAAGG--------GCTCCGACCG-CTGTAAGCGTATGGTTTCAGGATCTATTTCACTCC 33840 Query 493 C-CGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGG 551 | | || |||| ||||||||||||||||||| ||||| || | ||||||||| | ||| Sbjct 33839 CTTGTCA-GGGTTCTTTTCACCTTTCCCTCAC-GTACTGGTTCACTATCGGTCTCTCAGG 33782 Query 552 AGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACAC 590 ||||||||| ||| ||| ||||||||||||||||| || Sbjct 33781 AGTATTTAGCCTTGGCGGATGGTCCCGCCAGATTCATAC 33743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817593020416