Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq272 266 8e-69 >seq272 Length=50737 Score = 266 bits (294), Expect = 8e-69 Identities = 307/397 (77%), Gaps = 21/397 (5%) Strand=Plus/Minus Query 30 TTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCC 89 ||||||||| | |||||||||||||| | || |||||| | ||| |||||||||| Sbjct 34099 TTTTCAACGTCAACGGGTTCGGTCCTCCACTATGT-GTTACCACAGCTT-CAACCTGCCC 34042 Query 90 ATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTA-GACGCCCTAGTAAGA 148 | ||| |||||| | |||||| || ||||| | | | |||| | ||||||| | ||| Sbjct 34041 A-AGGGTAGATCACACGGTTT-CGCGTCTACCACT-ACCAACTATGGCGCCCTATTCAGA 33985 Query 149 CTCGCTTTTCGCTACGCCTCCCCTATT---CGGTTAAGCTTTGCCACTGAAAA---TAAG 202 |||||||| ||||||| |||| | | | | | | | |||| || ||| ||| Sbjct 33984 CTCGCTTT-CGCTACGGCTCCACAGCTGAACTGCTTAACCTTGC---TGGAAACGGTAAC 33929 Query 203 TCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTG 262 ||| | | |||||| ||||||| |||| ||||||| |||| |||||| || ||| | Sbjct 33928 TCGTAGGCTCATTATGCAAAAGGCACGCCGTCACCCCCTAAAG--GGCTCCGACCGCT-G 33872 Query 263 TACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCC 322 || || || |||||||||||||||||||||||| | || ||| |||||||| |||||||| Sbjct 33871 TAAGCGTATGGTTTCAGGATCTATTTCACTCCCTTGTCAGGG-TTCTTTTCACCTTTCCC 33813 Query 323 TCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCC 382 ||||| |||| |||||||||||||| |||| ||||||||||||||| |||||||||| | Sbjct 33812 TCACG-TACTGGTTCACTATCGGTCTCTCAGGAGTATTTAGCCTTGGCGGATGGTCCCGC 33754 Query 383 CATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 || ||||| ||| ||||| ||||| ||| |||||| Sbjct 33753 CAGATTCATACAGGGTTTCACGTGCCCCGCACTACTC 33717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241595232256