Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq272 188 1e-45 >seq272 Length=50737 Score = 188 bits (208), Expect = 1e-45 Identities = 227/305 (74%), Gaps = 3/305 (1%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| ||||| ||| || ||||||| |||||| || |||||||||||||||||| Sbjct 31615 GGCATGGCTGGATCAGAGTTGCCTCCATTGTCCAATATTCCTCACTGCTGCCTCCCGTAG 31556 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||||||||||| ||| ||||| | || |||||||| | ||||| || Sbjct 31555 GAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATCTCCCTCTCAGGACCCCTACCTAT 31496 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||| | | ||||| || ||| | ||||| ||| ||||| || ||| | |||||| | Sbjct 31495 CGTAGCCATGGTGTGCCGTTACCACACCATCTAGCTAATAGGACGCATACTCATCTTCAA 31436 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCT-GACATTATGCGGTATTAGCGTT 239 || |||||| ||| | || || | | || ||| | | |||| ||||||| Sbjct 31435 GCCATAAATGTTTAATATAATCATCAGGTGAT-GTCTATATACTATGGGGTATTAATCCA 31377 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 ||||||| | | |||||| | || ||||||| ||| ||| ||||| |||||||||| Sbjct 31376 CGTTTCC-ATGGCTATTCCCCGCTTGAAGGCAGATTGTATACGCGTTACGCACCCGTCCG 31318 Query 300 CCACT 304 ||||| Sbjct 31317 CCACT 31313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998396166144