Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq272 156 7e-36 >seq272 Length=50737 Score = 156 bits (172), Expect = 7e-36 Identities = 216/293 (74%), Gaps = 7/293 (2%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 || ||||||||| | ||||||||||| | || ||| |||||||| | ||||| Sbjct 31982 CCTACGCTTTCGTCCATCAGCGTCAGTACATTATTAGTGATCTGCCTTCGCAATAGGTGT 31923 Query 61 TCCTCCGTA-TATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCA 119 || | ||| |||||| ||||||||||||||||| ||||| | | || | | Sbjct 31922 TC-TGTGTAATATCTATGCATTTCACCGCTACACTACACATTCCAACCACTTCATAATGA 31864 Query 120 CTCAAGAAAAACAGTTTCAAATGCAGG-CTATGGGTTGAGCC-CATAGTTTTCACATCTG 177 |||||||| |||||| |||| ||| ||| | || ||| || | ||| ||| ||| Sbjct 31863 CTCAAGAACAACAGTATCAATGGCAATTCTACAG-TTAAGCTGCAGACTTT-CACCACTG 31806 Query 178 ACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCT 237 |||| | |||||||| ||||||| ||||||| | ||||||||||||| | ||| Sbjct 31805 ACTTATTATTCCGCCTACGGACCCTTTAAACCCAATGATTCCGGATAACGCTCGGACCCT 31746 Query 238 ACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||||| |||||||||| ||||||| | |||| Sbjct 31745 CCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGT-CCTTATTCATACGGTA 31694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828796916864