Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq272 277 4e-72 >seq272 Length=50737 Score = 277 bits (306), Expect = 4e-72 Identities = 319/421 (76%), Gaps = 19/421 (5%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGG-CCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 |||||||||| ||| || ||||| | ||||||||||||||| ||||| |||| |||| Sbjct 31647 TTTACAACCCATAGGGCCGTCTTCCTGCACGCGGCATGGCTGGATCAGAGTTGCCTCCAT 31588 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| ||||||||| |||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 31587 TGTCCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTG 31528 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 ||| | || |||||||| | ||| ||||| ||| |||| ||| ||||| | || Sbjct 31527 TGGGGGATCTCCCTCTCAGGACCCCTACCTATCGTAGCCATGGTGTGCCGTTACCACACC 31468 Query 184 AACTAGCTAAT----CCCAT-CT-GGGTTCATCCGATA---GTGAGAGGCCCGAAGGTCC 234 | ||||||||| | ||| || |||| | ||| || | | || Sbjct 31467 ATCTAGCTAATAGGACGCATACTCATCTTCAAGCCATAAATGTTTAA-----TATAATCA 31413 Query 235 CCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCT 294 | | |||| || |||| ||||||| | |||||||| ||| ||| |||| Sbjct 31412 TCAGGTGATGTCTATATAC--TATGGGGTATTAATCCACGTTTCCA-TGGCTATTCCCCG 31356 Query 295 CCATCAGGCAG-TTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAA 353 | |||||| || | | |||| |||||||||||||||||||||| ||| ||||| Sbjct 31355 CTTGAAGGCAGATTGTATACGCGTTACGCACCCGTCCGCCACTCGTCAGCAAAGAAGCAA 31296 Query 354 GCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGA 413 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 31295 GCTTCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGA 31236 Query 414 G 414 | Sbjct 31235 G 31235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222395305984