Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq272 221 4e-55 >seq272 Length=50737 Score = 221 bits (244), Expect = 4e-55 Identities = 267/359 (74%), Gaps = 21/359 (6%) Strand=Plus/Plus Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220 ||||| ||||||||| |||| ||||||||| |||| ||| ||||| |||| | || Sbjct 31450 GCGTCCTATTAGCTAGATGGTGTGGTAACGGCACACCATGGCTACGATAGGTAGGGGTCC 31509 Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280 |||||||| |||| ||||| ||| |||||||||||| ||| |||||||||||||||||| Sbjct 31510 TGAGAGGGAGATCCCCCACACTGGTACTGAGACACGGACCAGACTCCTACGGGAGGCAGC 31569 Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAA 340 |||| ||||||||| ||||||| || ||||| |||| | |||||||| || || Sbjct 31570 AGTGAGGAATATTGGACAATGGAGGCAACTCTGATCCAGCCATGCCGCGTGCAGGAAGAC 31629 Query 341 GG-CCTTCGGGTCGTAAA--GC-TCTGTCCTCAAG--------------GAAGAT-AATG 381 || ||| |||| ||||| || | | | | ||| | |||| || Sbjct 31630 GGCCCTATGGGTTGTAAACTGCTTTTATACGGAAGAACCACATCTACGTGTAGATGCTTG 31689 Query 382 ACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGG 441 ||||||| | || ||| ||||||||| |||||||||||||||||||||||| ||| Sbjct 31690 ACGGTACCGTATGAATAAG-GACGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGG 31748 Query 442 GGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 | | ||||||||||||||| | | ||| |||||||| |||||| || | |||||| Sbjct 31749 GTCCGAGCGTTATCCGGAATCA-TTGGGTTTAAAGGGTCCGTAGGCGGAATAATAAGTC 31806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497594249216