Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq272 260 3e-67 >seq272 Length=50737 Score = 260 bits (288), Expect = 3e-67 Identities = 300/396 (76%), Gaps = 12/396 (3%) Strand=Plus/Plus Query 19 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 78 ||||||||| |||||||||||||||||||||||| |||| | ||||||||||||||| | Sbjct 31711 CGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTCCGAGCGTTATCCGGAATCA 31770 Query 79 CTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAAC 138 |||| |||||||| |||||| || | |||||||| |||||||| || ||| ||| Sbjct 31771 TTGGGTTTAAAGGGTCCGTAGGCGGAATAATAAGTCAGTGGTGAAAGTCTGCAGCTTAAC 31830 Query 139 CCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCA----GGAGGGGCAAGTGGAATTC 194 | | ||| |||| |||| | || |||| || | || || |||||| Sbjct 31831 TGTAGAATTGCCATTGATACTGTTGTTCTTGAGT-CATTATGAAGTGG---TTGGAATGT 31886 Query 195 CTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGC 254 ||||||||||||||||||| ||||||||| ||||||| | |||||||| | | | Sbjct 31887 GTAGTGTAGCGGTGAAATGCATAGATATTACACAGAACACCTATTGCGAAGGCAGATCAC 31946 Query 255 T-GGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCT 313 | | ||| |||||| |||| | ||||||||| || ||| |||||||||||||||||| Sbjct 31947 TAATAATGT-ACTGACGCTGATGGACGAAAGCGTAGGTAGCGAACAGGATTAGATACCCT 32005 Query 314 GGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCA-TAAGTGCTCCGGTGC 372 ||||||| ||||||||||||||| |||||| |||| || | | | || ||| |||| Sbjct 32006 GGTAGTCTACGCCGTAAACGATGGTTACTAGCTGTCCGGCCTAATTGAGGGCT-GGGTGG 32064 Query 373 CGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||| || | ||||||| |||||||||||||| Sbjct 32065 TTAAGCGAAAGTGATAAGTAACCCACCTGGGGAGTA 32100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203195379712