Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq272 369 1e-99 >seq272 Length=50737 Score = 369 bits (408), Expect = 1e-99 Identities = 429/566 (76%), Gaps = 11/566 (2%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACA--GTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 |||||| ||| |||||| || || | | | |||||| ||||||| ||||||||||| Sbjct 33981 CGAGTCTGAATAGGGCGCCATAGTTGGTAGTGGTAGACGCGAAACCGTGTGATCTACCCT 34040 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 ||| |||| ||||| || |||||||| |||||| |||||||| | | |||||||| Sbjct 34041 TGGGCAGGTTGAAGCTGTGGTAACACATAGTGGAGGACCGAACCCGTTGACGTTGAAAAG 34100 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 | ||||||| ||| ||||||||||||||||| || |||||| |||||||||| || || Sbjct 34101 TCTTGGGATGACCTGAGGGTAGGGGTGAAAGGCCAATCAAACTCGGAAATAGCTCGTACT 34160 Query 180 CTCCGAAAACTATTTAGGTAGTGCCTCA-AGT-ATCACCATCGGGGGTAGAGC-ACTGTT 236 | |||||| |||||||| || | ||| | || | || |||||| |||| | Sbjct 34161 CCCCGAAATGCATTTAGGTGCAGCGATATAGTTAGTTTTATAGAGG-TAGAGCTACTGAT 34219 Query 237 ATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTT 296 ||| | |||| | | | | |||||| | | |||||||||||||| || | | Sbjct 34220 -TGGATGCGGGGGCTTCACCGCCTACCAATTCCTGACAAACTCCGAATGCT-ATAAAATG 34277 Query 297 TACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGAC 356 | ||||||||||||||||||||||||| || |||||||| ||||| || ||| Sbjct 34278 ATGCATATCAGTGAGGGCATGGGTGCTAAGGTCCATGTCCGAGAGGGAAAGAACCCAGAC 34337 Query 357 TATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGAC 416 ||||||||||| ||| ||||| | |||||| || |||| || | ||| |||| Sbjct 34338 CATCAGCTAAGGTCCCCAAATGTATGTTAAGTTGAATAAACGCGGTTGAACTGCCCAGAC 34397 Query 417 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 34398 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 34457 Query 477 CGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGAT-C 535 |||| || ||| ||||||||||||||| || || | |||||||||| ||| | | Sbjct 34458 CGAGCGGTTCGGCATGGATAATAATCGGGCATAAACAT-ACTACCGAAGCTATGGACTAC 34516 Query 536 A-TTTATATGATCGGTAGGGGAGCAT 560 | |||| | ||||||||||||| Sbjct 34517 AGTTTACTGTAGTGGTAGGGGAGCAT 34542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689593511936