Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Seriola_20quinqueradiata_20[genbank_20GCA_5F002217815.1_202017-07- 05] 384 sequences; 639,269,536 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq48 462 7e-128 seq82 161 3e-37 seq152 93.3 1e-16 seq129 93.3 1e-16 >seq48 Length=236306 Score = 462 bits (512), Expect = 7e-128 Identities = 424/528 (80%), Gaps = 26/528 (5%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 160607 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 160548 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 160547 TCCCCGAGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 160488 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 160487 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 160428 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||||||||||||||| ||| |||||| | |||||| | Sbjct 160427 AGGCACAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGAGACGTCGCCGCC 160368 Query 240 TCAAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAA---------GGAGCCCCG 288 | || | ||||| | | | ||||| || ||||||| || ||||| Sbjct 160367 ACGGGGGCCAGCGATCGGCTCGAGGTTATCTAGAGTCACCAAAGCGGCCGGGGCACCCCG 160308 Query 289 A-AGG------GCGTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGT 338 | ||| || | |||||| |||| |||||| ||| | | || || ||| | | | Sbjct 160307 AGAGGCACCCCGCATGGGTTTTGGATCTGATAAATGCACGCATCCCCGGAGGTCAGCGCT 160248 Query 339 TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCA 396 || ||||||||||||||||||||| |||| |||||||| ||| || | | | |||| Sbjct 160247 CGTTTGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTGA-GAGCGATCA 160189 Query 397 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACT 456 || ||| ||||||||||||||||||||||||||||||||||||| | | | |||| Sbjct 160188 AAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTACT 160129 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct 160128 TAGACTTGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 160082 Score = 462 bits (512), Expect = 7e-128 Identities = 424/528 (80%), Gaps = 26/528 (5%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 171460 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 171401 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 171400 TCCCCGAGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 171341 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 171340 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 171281 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||||||||||||||| ||| |||||| | |||||| | Sbjct 171280 AGGCACAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGAGACGTCGCCGCC 171221 Query 240 TCAAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAA---------GGAGCCCCG 288 | || | ||||| | | | ||||| || ||||||| || ||||| Sbjct 171220 ACGGGGGCCAGCGATCGGCTCGAGGTTATCTAGAGTCACCAAAGCGGCCGGGGCACCCCG 171161 Query 289 A-AGG------GCGTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGT 338 | ||| || | |||||| |||| |||||| ||| | | || || ||| | | | Sbjct 171160 AGAGGCACCCCGCATGGGTTTTGGATCTGATAAATGCACGCATCCCCGGAGGTCAGCGCT 171101 Query 339 TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCA 396 || ||||||||||||||||||||| |||| |||||||| ||| || | | | |||| Sbjct 171100 CGTTTGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTGA-GAGCGATCA 171042 Query 397 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACT 456 || ||| ||||||||||||||||||||||||||||||||||||| | | | |||| Sbjct 171041 AAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTACT 170982 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct 170981 TAGACTTGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 170935 Score = 462 bits (512), Expect = 7e-128 Identities = 424/528 (80%), Gaps = 26/528 (5%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 182298 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 182239 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 182238 TCCCCGAGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 182179 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 182178 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 182119 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||||||||||||||| ||| |||||| | |||||| | Sbjct 182118 AGGCACAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGAGACGTCGCCGCC 182059 Query 240 TCAAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAA---------GGAGCCCCG 288 | || | ||||| | | | ||||| || ||||||| || ||||| Sbjct 182058 ACGGGGGCCAGCGATCGGCTCGAGGTTATCTAGAGTCACCAAAGCGGCCGGGGCACCCCG 181999 Query 289 A-AGG------GCGTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGT 338 | ||| || | |||||| |||| |||||| ||| | | || || ||| | | | Sbjct 181998 AGAGGCACCCCGCATGGGTTTTGGATCTGATAAATGCACGCATCCCCGGAGGTCAGCGCT 181939 Query 339 TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCA 396 || ||||||||||||||||||||| |||| |||||||| ||| || | | | |||| Sbjct 181938 CGTTTGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTGA-GAGCGATCA 181880 Query 397 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACT 456 || ||| ||||||||||||||||||||||||||||||||||||| | | | |||| Sbjct 181879 AAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTACT 181820 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct 181819 TAGACTTGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 181773 Score = 462 bits (512), Expect = 7e-128 Identities = 424/528 (80%), Gaps = 26/528 (5%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 193150 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 193091 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 193090 TCCCCGAGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 193031 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 193030 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 192971 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||||||||||||||| ||| |||||| | |||||| | Sbjct 192970 AGGCACAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGAGACGTCGCCGCC 192911 Query 240 TCAAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAA---------GGAGCCCCG 288 | || | ||||| | | | ||||| || ||||||| || ||||| Sbjct 192910 ACGGGGGCCAGCGATCGGCTCGAGGTTATCTAGAGTCACCAAAGCGGCCGGGGCACCCCG 192851 Query 289 A-AGG------GCGTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGT 338 | ||| || | |||||| |||| |||||| ||| | | || || ||| | | | Sbjct 192850 AGAGGCACCCCGCATGGGTTTTGGATCTGATAAATGCACGCATCCCCGGAGGTCAGCGCT 192791 Query 339 TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCA 396 || ||||||||||||||||||||| |||| |||||||| ||| || | | | |||| Sbjct 192790 CGTTTGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTGA-GAGCGATCA 192732 Query 397 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACT 456 || ||| ||||||||||||||||||||||||||||||||||||| | | | |||| Sbjct 192731 AAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTACT 192672 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct 192671 TAGACTTGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 192625 >seq82 Length=18119132 Score = 161 bits (178), Expect = 3e-37 Identities = 144/178 (81%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||| ||||||||| || ||||||||||||| || ||||| | ||||||| Sbjct 3783546 GTACTCATTCAAATTACAAGGCCTCAAAAGAGCCCTGAATTGTTATTTTTCATCACTACT 3783487 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||| | ||| ||| ||| |||||||||| || || ||||||||| ||||||||| | | Sbjct 3783486 TCCCAGAGTCAGGAGTGGATAATTTGCGC--CTTCTACCTTCCTTGAATGTGGTAGTCAT 3783429 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 ||||||||||||||||| |||||| || | | |||| ||||||| || | |||||| Sbjct 3783428 TTCTCAGGCTCCCTCTCTGGAATCAAATCGTGATTCTACGTTACCTGTGGTCACCATG 3783371 Score = 80.6 bits (88), Expect = 8e-13 Identities = 99/131 (76%), Gaps = 7/131 (5%) Strand=Plus/Minus Query 139 GAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATC 198 |||||||| ||| |||| || |||| | | |||||| | ||| | ||| |||||| Sbjct 3783300 GAATCGAATCCTGATTCTCCATTACATGCGGTCACCATGCTGGGCAAATAT---ACCATC 3783244 Query 199 GAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC-TCAAGGCCATGCGAT--T 255 ||||||||||||| ||| |||||||||| |||||||| | | ||||| ||||| | Sbjct 3783243 AAAAGTTGATAGGGAAGACATTTGAATGAGACATCGCCGCCATGGGGGCCA-GCGATCAT 3783185 Query 256 CGTTAAGTTAT 266 ||||||||| Sbjct 3783184 TTTTAAGTTAT 3783174 >seq152 Length=5132711 Score = 93.3 bits (102), Expect = 1e-16 Identities = 83/102 (81%), Gaps = 3/102 (3%) Strand=Plus/Plus Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-CTATCAAAT 399 || |||||||||||| |||||||| ||| |||||||| ||| | | | | |||||| Sbjct 1985705 TTTGCATGTATTAGCCCTAGAATTGCCA--GTTATCCAAGTAACATGAGAGCGATCAAAG 1985762 Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441 ||| ||||||||||||||||||| |||| | |||||||||| Sbjct 1985763 GAACCATAACTGATTTAATGAGCCGTTCGTATTTTCACTGTA 1985804 >seq129 Length=15713724 Score = 93.3 bits (102), Expect = 1e-16 Identities = 80/98 (82%), Gaps = 1/98 (1%) Strand=Plus/Minus Query 407 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCA 466 |||||||||||| |||||||| ||||| | ||||| | || | |||||||| |||| Sbjct 4982124 AACTGATTTAATCAGCCATTCACAGTTCCTCTGTAGCGTCTGTGTGCACTTAGACTTGCA 4982065 Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||| |||||||| ||| |||||| |||||||||| Sbjct 4982064 TGGCTTTATCTTTGACACAGACATATG-CTACTGGCAG 4982028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510394200064