Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq8864 165 1e-38
seq14667 156 6e-36
seq6604 149 9e-34
seq9938 89.7 8e-16
seq14749 82.4 1e-13
seq6866 82.4 1e-13
>seq8864
Length=2357
Score = 165 bits (182), Expect = 1e-38
Identities = 180/234 (77%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||| |
Sbjct 2305 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAATT-C 2248
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||||| | || | || |||| | |||| ||||||| |||| | ||
Sbjct 2247 CTCGTTGATGGGAAATAGTTTCAATCCCCAGTCCCGATCACGAGCGGGGTTCAGCGGGTT 2188
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| ||| ||||| ||| || | || || ||| || ||| ||||||||||
Sbjct 2187 ACCCGCGCCTCTCGGCGCAGGGGAGACACACGCTGATCCGCCCATTGTGGCGCGCGTGCA 2128
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| ||| | ||| ||||||
Sbjct 2127 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCCATCTTGCGTGGC 2075
>seq14667
Length=1487825
Score = 156 bits (172), Expect = 6e-36
Identities = 178/234 (76%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||| |
Sbjct 357177 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAATT-C 357234
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||||| | || | || |||| | |||| ||||||| |||| || ||
Sbjct 357235 CTCGTTGATGGGAAATAGTTTCAATCTCCAGTCCCGATCACGAGCGGGGTTCAGCGAGTT 357294
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| ||| ||||| || | | || || ||| || ||| ||||||||||
Sbjct 357295 ACCCGTGCCTCTCGGCGCAGTGTAGACACACGCTGATCCGCCCATTGTGGCGCGCGTGCA 357354
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| ||| | || ||||||
Sbjct 357355 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCCATCTCGCGTGGC 357407
>seq6604
Length=1756
Score = 149 bits (164), Expect = 9e-34
Identities = 176/232 (76%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||| |
Sbjct 987 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAATT-C 930
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||||| | || || |||| | |||| ||||||| |||| | ||
Sbjct 929 CTCGTTGATGGGAAATTGTTTCAATCCCCAGTCCCGATCACGAGCGGGGTTCAGCGGGTT 870
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| ||| || || ||| ||||| || ||| || ||| ||||||||||
Sbjct 869 ACCCGCGCCTCTCAGCGCAGGG--TAGACACGCTGATCCGCCCATTGTGGCGCGCGTGCA 812
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231
|||| | |||||||||||||||||||||||||||||| ||| | ||| ||||
Sbjct 811 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCCATCTTGCGTG 761
>seq9938
Length=3524
Score = 89.7 bits (98), Expect = 8e-16
Identities = 62/68 (91%), Gaps = 2/68 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||| |||
Sbjct 2040 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAA-TTC 2097
Query 61 CTCGTTGA 68
||||||||
Sbjct 2098 CTCGTTGA 2105
Score = 84.2 bits (92), Expect = 3e-14
Identities = 89/116 (77%), Gaps = 1/116 (1%)
Strand=Plus/Plus
Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177
||||||| ||| ||||| ||| | | || || ||| || ||| |||||||||
Sbjct 2203 TTACCCGCGCCTCTCGGCGCAGGGTAGACACACGCTGATCCGCCCATTGTGGCGCGCGTG 2262
Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
| |||| | |||||||||||||||||||||||||||||| ||| | || ||||||
Sbjct 2263 CAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCCATCTCGCGTGGC 2317
>seq14749
Length=77162
Score = 82.4 bits (90), Expect = 1e-13
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 162 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 221
|| ||| |||||||||| |||| | |||||||||||||||||||||||||||||| |||
Sbjct 1508 CATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCC 1566
Query 222 AACTTCCGTGGC 233
| || ||||||
Sbjct 1567 ATCTCGCGTGGC 1578
>seq6866
Length=2368
Score = 82.4 bits (90), Expect = 1e-13
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 162 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 221
|| ||| |||||||||| |||| | |||||||||||||||||||||||||||||| |||
Sbjct 2300 CATTGTTGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCC 2242
Query 222 AACTTCCGTGGC 233
| || ||||||
Sbjct 2241 ATCTCGCGTGGC 2230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751375806630
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |