Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq8864 165 1e-38 seq14667 156 6e-36 seq6604 149 9e-34 seq9938 89.7 8e-16 seq14749 82.4 1e-13 seq6866 82.4 1e-13 >seq8864 Length=2357 Score = 165 bits (182), Expect = 1e-38 Identities = 180/234 (77%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||| | Sbjct 2305 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAATT-C 2248 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||||| | || | || |||| | |||| ||||||| |||| | || Sbjct 2247 CTCGTTGATGGGAAATAGTTTCAATCCCCAGTCCCGATCACGAGCGGGGTTCAGCGGGTT 2188 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||| ||||| ||| || | || || ||| || ||| |||||||||| Sbjct 2187 ACCCGCGCCTCTCGGCGCAGGGGAGACACACGCTGATCCGCCCATTGTGGCGCGCGTGCA 2128 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||| | ||| |||||| Sbjct 2127 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCCATCTTGCGTGGC 2075 >seq14667 Length=1487825 Score = 156 bits (172), Expect = 6e-36 Identities = 178/234 (76%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||| | Sbjct 357177 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAATT-C 357234 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||||| | || | || |||| | |||| ||||||| |||| || || Sbjct 357235 CTCGTTGATGGGAAATAGTTTCAATCTCCAGTCCCGATCACGAGCGGGGTTCAGCGAGTT 357294 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||| ||||| || | | || || ||| || ||| |||||||||| Sbjct 357295 ACCCGTGCCTCTCGGCGCAGTGTAGACACACGCTGATCCGCCCATTGTGGCGCGCGTGCA 357354 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||| | || |||||| Sbjct 357355 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCCATCTCGCGTGGC 357407 >seq6604 Length=1756 Score = 149 bits (164), Expect = 9e-34 Identities = 176/232 (76%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||| | Sbjct 987 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAATT-C 930 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||||| | || || |||| | |||| ||||||| |||| | || Sbjct 929 CTCGTTGATGGGAAATTGTTTCAATCCCCAGTCCCGATCACGAGCGGGGTTCAGCGGGTT 870 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||| || || ||| ||||| || ||| || ||| |||||||||| Sbjct 869 ACCCGCGCCTCTCAGCGCAGGG--TAGACACGCTGATCCGCCCATTGTGGCGCGCGTGCA 812 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 |||| | |||||||||||||||||||||||||||||| ||| | ||| |||| Sbjct 811 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCCATCTTGCGTG 761 >seq9938 Length=3524 Score = 89.7 bits (98), Expect = 8e-16 Identities = 62/68 (91%), Gaps = 2/68 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||| ||| Sbjct 2040 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAA-TTC 2097 Query 61 CTCGTTGA 68 |||||||| Sbjct 2098 CTCGTTGA 2105 Score = 84.2 bits (92), Expect = 3e-14 Identities = 89/116 (77%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 ||||||| ||| ||||| ||| | | || || ||| || ||| ||||||||| Sbjct 2203 TTACCCGCGCCTCTCGGCGCAGGGTAGACACACGCTGATCCGCCCATTGTGGCGCGCGTG 2262 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 | |||| | |||||||||||||||||||||||||||||| ||| | || |||||| Sbjct 2263 CAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCCATCTCGCGTGGC 2317 >seq14749 Length=77162 Score = 82.4 bits (90), Expect = 1e-13 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 162 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 221 || ||| |||||||||| |||| | |||||||||||||||||||||||||||||| ||| Sbjct 1508 CATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCC 1566 Query 222 AACTTCCGTGGC 233 | || |||||| Sbjct 1567 ATCTCGCGTGGC 1578 >seq6866 Length=2368 Score = 82.4 bits (90), Expect = 1e-13 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 162 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 221 || ||| |||||||||| |||| | |||||||||||||||||||||||||||||| ||| Sbjct 2300 CATTGTTGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCC 2242 Query 222 AACTTCCGTGGC 233 | || |||||| Sbjct 2241 ATCTCGCGTGGC 2230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751375806630