Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq17633 179 7e-43 seq21339 170 4e-40 seq19344 129 1e-27 seq6604 96.9 6e-18 >seq17633 Length=921127 Score = 179 bits (198), Expect = 7e-43 Identities = 219/293 (75%), Gaps = 18/293 (6%) Strand=Plus/Minus Query 35 CCGCATGCCCTTCACTGGGTGTGCCGG-------GGAGCCAGGA-CTTTTACTTTGAAAA 86 ||| |||||||| |||||||| |||| || ||| ||| | ||||||||||||| Sbjct 63213 CCGGATGCCCTTAGCTGGGTGT-CCGGTCACCTCGGGGCCCGGAGCGTTTACTTTGAAAA 63155 Query 87 AATTAGAGTGTTCAAAGCAGGCCTTTGCTCG------AATACATTAGCATGGAATAATAG 140 ||||||||||||||||||||||| ||| ||||| ||| |||||||| | Sbjct 63154 AATTAGAGTGTTCAAAGCAGGCCGCCCGTCGCCGCTGAATACCGCAGCTAGGAATAATGG 63095 Query 141 AATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC-GCCGTAATGATTAATAGGGA 199 |||||||| | |||||||||||||| ||||||| | ||| | | |||||||| ||||| Sbjct 63094 AATAGGAC-TCCGGTTCTATTTTGTGGGTTTCTGGAACCCGGGGCCATGATTAAGAGGGA 63036 Query 200 TAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTA 259 | | |||||| | ||||| | |||||||||||||||||| ||||| Sbjct 63035 TGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGG 62976 Query 260 ACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 || | |||||||| || ||||| |||||||||||||||| |||||||||| Sbjct 62975 ACGAAAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 62924 >seq21339 Length=814 Score = 170 bits (188), Expect = 4e-40 Identities = 217/293 (74%), Gaps = 18/293 (6%) Strand=Plus/Minus Query 35 CCGCATGCCCTTCACTGGGTGTGCCGG-------GGAGCCAGGA-CTTTTACTTTGAAAA 86 ||| |||||||| || ||||| |||| || ||| ||| | ||||||||||||| Sbjct 557 CCGGATGCCCTTAGCTTGGTGT-CCGGTCACCTCGGGGCCCGGAGCGTTTACTTTGAAAA 499 Query 87 AATTAGAGTGTTCAAAGCAGGCCTTTGCTCG------AATACATTAGCATGGAATAATAG 140 ||||||||||||||||||||||| ||| ||||| ||| |||||||| | Sbjct 498 AATTAGAGTGTTCAAAGCAGGCCGCCCGTCGCCGCTGAATACCGCAGCTAGGAATAATGG 439 Query 141 AATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC-GCCGTAATGATTAATAGGGA 199 |||||||| | |||||||||||||| ||||||| | ||| | | |||||||| ||||| Sbjct 438 AATAGGAC-TCCGGTTCTATTTTGTGGGTTTCTGGAACCCGGGGCCATGATTAAGAGGGA 380 Query 200 TAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTA 259 | |||||| | ||||| | |||||||||||||||||| ||||| Sbjct 379 CGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGG 320 Query 260 ACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 || | |||||||| || ||||| |||||||||||||||| |||||||||| Sbjct 319 ACGAAAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 268 >seq19344 Length=1152264 Score = 129 bits (142), Expect = 1e-27 Identities = 168/227 (74%), Gaps = 9/227 (4%) Strand=Plus/Minus Query 93 AGTGTTCAAAGCAGGCCT----TTGCT--CGAATACATTAGCATGGAATAATAGAATAGG 146 ||||||||||||||||| | || ||||||| ||| |||||||| ||||||| Sbjct 804104 AGTGTTCAAAGCAGGCCGCCCGTCGCCGCCGAATACCGCAGCTAGGAATAATGGAATAGG 804045 Query 147 ACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC-GCCGTAATGATTAATAGGGATAGTCG 205 || | |||||||||||||| ||||||| | ||| | | |||||||| ||||| | || Sbjct 804044 AC-TCCGGTTCTATTTTGTGGGTTTCTGGAACCCGGGGCCATGATTAAGAGGGACGGCCG 803986 Query 206 GGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACT 265 |||| | ||||| | |||||||||||||||||| ||||| || | Sbjct 803985 GGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACGAAA 803926 Query 266 GCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 |||||||| || ||||| |||||||||||||||| ||| |||||| Sbjct 803925 GCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAATGAAAGT 803880 >seq6604 Length=1756 Score = 96.9 bits (106), Expect = 6e-18 Identities = 119/160 (74%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 154 GTTCTATTTTGTTGGTTTCTAGGACC-GCCGTAATGATTAATAGGGATAGTCGGGGGTGT 212 |||||||||||| ||||||| | ||| | | |||||||| ||||| | |||||| | Sbjct 176 GTTCTATTTTGTGGGTTTCTGGAACCCGGGGCCATGATTAAGAGGGACGGCCGGGGGCAT 235 Query 213 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 272 ||||| | |||||||||||||||||| ||||| || | ||||||| Sbjct 236 TCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACGAAAGCGAAAG 295 Query 273 CGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 | || ||||| |||||||||||||||| |||||||||| Sbjct 296 CATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914415838336