Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq17633 179 7e-43
seq21339 170 4e-40
seq19344 129 1e-27
seq6604 96.9 6e-18
>seq17633
Length=921127
Score = 179 bits (198), Expect = 7e-43
Identities = 219/293 (75%), Gaps = 18/293 (6%)
Strand=Plus/Minus
Query 35 CCGCATGCCCTTCACTGGGTGTGCCGG-------GGAGCCAGGA-CTTTTACTTTGAAAA 86
||| |||||||| |||||||| |||| || ||| ||| | |||||||||||||
Sbjct 63213 CCGGATGCCCTTAGCTGGGTGT-CCGGTCACCTCGGGGCCCGGAGCGTTTACTTTGAAAA 63155
Query 87 AATTAGAGTGTTCAAAGCAGGCCTTTGCTCG------AATACATTAGCATGGAATAATAG 140
||||||||||||||||||||||| ||| ||||| ||| |||||||| |
Sbjct 63154 AATTAGAGTGTTCAAAGCAGGCCGCCCGTCGCCGCTGAATACCGCAGCTAGGAATAATGG 63095
Query 141 AATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC-GCCGTAATGATTAATAGGGA 199
|||||||| | |||||||||||||| ||||||| | ||| | | |||||||| |||||
Sbjct 63094 AATAGGAC-TCCGGTTCTATTTTGTGGGTTTCTGGAACCCGGGGCCATGATTAAGAGGGA 63036
Query 200 TAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTA 259
| | |||||| | ||||| | |||||||||||||||||| |||||
Sbjct 63035 TGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGG 62976
Query 260 ACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|| | |||||||| || ||||| |||||||||||||||| ||||||||||
Sbjct 62975 ACGAAAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 62924
>seq21339
Length=814
Score = 170 bits (188), Expect = 4e-40
Identities = 217/293 (74%), Gaps = 18/293 (6%)
Strand=Plus/Minus
Query 35 CCGCATGCCCTTCACTGGGTGTGCCGG-------GGAGCCAGGA-CTTTTACTTTGAAAA 86
||| |||||||| || ||||| |||| || ||| ||| | |||||||||||||
Sbjct 557 CCGGATGCCCTTAGCTTGGTGT-CCGGTCACCTCGGGGCCCGGAGCGTTTACTTTGAAAA 499
Query 87 AATTAGAGTGTTCAAAGCAGGCCTTTGCTCG------AATACATTAGCATGGAATAATAG 140
||||||||||||||||||||||| ||| ||||| ||| |||||||| |
Sbjct 498 AATTAGAGTGTTCAAAGCAGGCCGCCCGTCGCCGCTGAATACCGCAGCTAGGAATAATGG 439
Query 141 AATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC-GCCGTAATGATTAATAGGGA 199
|||||||| | |||||||||||||| ||||||| | ||| | | |||||||| |||||
Sbjct 438 AATAGGAC-TCCGGTTCTATTTTGTGGGTTTCTGGAACCCGGGGCCATGATTAAGAGGGA 380
Query 200 TAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTA 259
| |||||| | ||||| | |||||||||||||||||| |||||
Sbjct 379 CGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGG 320
Query 260 ACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|| | |||||||| || ||||| |||||||||||||||| ||||||||||
Sbjct 319 ACGAAAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 268
>seq19344
Length=1152264
Score = 129 bits (142), Expect = 1e-27
Identities = 168/227 (74%), Gaps = 9/227 (4%)
Strand=Plus/Minus
Query 93 AGTGTTCAAAGCAGGCCT----TTGCT--CGAATACATTAGCATGGAATAATAGAATAGG 146
||||||||||||||||| | || ||||||| ||| |||||||| |||||||
Sbjct 804104 AGTGTTCAAAGCAGGCCGCCCGTCGCCGCCGAATACCGCAGCTAGGAATAATGGAATAGG 804045
Query 147 ACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC-GCCGTAATGATTAATAGGGATAGTCG 205
|| | |||||||||||||| ||||||| | ||| | | |||||||| ||||| | ||
Sbjct 804044 AC-TCCGGTTCTATTTTGTGGGTTTCTGGAACCCGGGGCCATGATTAAGAGGGACGGCCG 803986
Query 206 GGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACT 265
|||| | ||||| | |||||||||||||||||| ||||| || |
Sbjct 803985 GGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACGAAA 803926
Query 266 GCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|||||||| || ||||| |||||||||||||||| ||| ||||||
Sbjct 803925 GCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAATGAAAGT 803880
>seq6604
Length=1756
Score = 96.9 bits (106), Expect = 6e-18
Identities = 119/160 (74%), Gaps = 2/160 (1%)
Strand=Plus/Plus
Query 154 GTTCTATTTTGTTGGTTTCTAGGACC-GCCGTAATGATTAATAGGGATAGTCGGGGGTGT 212
|||||||||||| ||||||| | ||| | | |||||||| ||||| | |||||| |
Sbjct 176 GTTCTATTTTGTGGGTTTCTGGAACCCGGGGCCATGATTAAGAGGGACGGCCGGGGGCAT 235
Query 213 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 272
||||| | |||||||||||||||||| ||||| || | |||||||
Sbjct 236 TCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACGAAAGCGAAAG 295
Query 273 CGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
| || ||||| |||||||||||||||| ||||||||||
Sbjct 296 CATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 914415838336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |