Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq11207 140 1e-30
seq20726 136 2e-29
seq11735 84.2 9e-14
>seq11207
Length=4626040
Score = 140 bits (154), Expect = 1e-30
Identities = 101/117 (86%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626
||| |||||||||||||||||||||||||| |||| |||||||| |||||| ||||||
Sbjct 609878 TGGTACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGGGGAAACCCTGGTG 609937
Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||| ||||||||| ||| ||||||||||| | ||| | |||||||||||||||
Sbjct 609938 GAGGCCCGCAGCGGTCCTGACGTGCAAATCGGTTGTCCGACCTGGGTATAGGGGCGA 609994
>seq20726
Length=1727696
Score = 136 bits (150), Expect = 2e-29
Identities = 131/168 (78%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 32 CCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAA 91
||||| |||||| |||| ||||||||||||| | || |||| |||||| | | |||||
Sbjct 233898 CCTTCTCGGAGTCGGGTTGCTTGGGAATGCAGCCCAAAGTGGGTGGTAAACTCCATCTAA 233839
Query 92 AGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCA 151
|||||||| |||| ||||||||||| ||||||| |||| ||||| ||||||| |
Sbjct 233838 GGCTAAATACTGGCACGAGACCGATAGTCAACAAGTACCGTGAGGGAAAGTTGAAAAGAA 233779
Query 152 CTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
||||| | |||||||| || || ||||||| ||| | ||| || ||
Sbjct 233778 CTTTGAAGAGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 233731
>seq11735
Length=455519
Score = 84.2 bits (92), Expect = 9e-14
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 42 GTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATAT 101
|||| |||| ||| ||||||||| | || ||| |||||| | | ||||| ||||||||
Sbjct 40537 GTCGGGTTGCTTGTGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAATAC 40596
Query 102 TGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCAC 152
||| ||||||||||| ||||||| |||| |||| ||||||| ||
Sbjct 40597 CGGCACGAGACCGATAGTCAACAAGTACCGTGAGGAAAAGTTGAAAAGAAC 40647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2078162121100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |