Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq6604 235 9e-60 seq14667 230 4e-58 seq9938 219 7e-55 seq8864 215 8e-54 seq17633 163 5e-38 seq3868 158 2e-36 seq14749 154 2e-35 seq21339 89.7 8e-16 seq15505 87.8 3e-15 seq3426 82.4 1e-13 seq6866 78.8 1e-12 >seq6604 Length=1756 Score = 235 bits (260), Expect = 9e-60 Identities = 201/245 (82%), Gaps = 5/245 (2%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| || Sbjct 829 CATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCC 771 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGA 136 | ||| | | | ||| | |||| | |||||||||||||| | || ||| | || Sbjct 770 ATCTTGCGT-GACTGAACGCCACTTGTCCCTCTAAGAAGTTGAACGCCGACCGCATGGGA 712 Query 137 TGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | | |||||||||| | | |||||||||||||||||||| | ||||||||||| Sbjct 711 CCGCGTAACTATTTAGCAAGCTGGAGTCTCGTTCGTTATCGGAATGATCCAGACAAATCG 652 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct 651 CTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCGAGAAAGAGCTATCAAT 592 Query 254 CTGTC 258 ||||| Sbjct 591 CTGTC 587 >seq14667 Length=1487825 Score = 230 bits (254), Expect = 4e-58 Identities = 200/245 (82%), Gaps = 5/245 (2%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| || Sbjct 357337 CATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCC 357395 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGA 136 | || | | ||||| | |||| | |||||||||||||| | |||||| | | Sbjct 357396 ATCTCGCGT-GGCTGAATGCCACTTGTCCCTCTAAGAAGTTGAACGCCAACCGCAAGGGG 357454 Query 137 TGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | | ||||||| || | |||||||||||||||||||| ||||||||||||| Sbjct 357455 CCGCGTAACTATTTAACAAGCCGGAGTCTCGTTCGTTATCGGAATGAACCAGACAAATCG 357514 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct 357515 CTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCGAGAAAGAGCTATCAAT 357574 Query 254 CTGTC 258 ||||| Sbjct 357575 CTGTC 357579 >seq9938 Length=3524 Score = 219 bits (242), Expect = 7e-55 Identities = 199/247 (81%), Gaps = 9/247 (4%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| || Sbjct 2247 CATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCC 2305 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGA 136 | || | | ||||| | |||| | |||||||||||||| | || ||| | || Sbjct 2306 ATCTCGCGT-GGCTGAACGCCACTTGTCCCTCTAAGAAGTTGAACGCCGACCGCA--CGG 2362 Query 137 TGGGGC-----TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191 | || ||||||||| | | ||||||||||||||| |||| | |||||||||| Sbjct 2363 GGCCGCATAACTATTTAGCAAGCTGGAGTCTCGTTCGTTATCAGAATGATCCAGACAAAT 2422 Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 | |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct 2423 CGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCGAGAAAGAGCTATCA 2482 Query 252 ATCTGTC 258 ||| ||| Sbjct 2483 ATCCGTC 2489 >seq8864 Length=2357 Score = 215 bits (238), Expect = 8e-54 Identities = 196/243 (81%), Gaps = 8/243 (3%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| || Sbjct 2145 CATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCC 2087 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGA 136 | ||| | | ||||| | |||| | |||||||||||||| | || ||| | | Sbjct 2086 ATCTTGCGT-GGCTGAACGCCACTTGTCCCTCTAAGAAGTTGAACGCCGACCGCACAGGG 2028 Query 137 TGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | | |||||||||| | | |||||||||||||||||||| | ||||||||||| Sbjct 2027 CCGCGTAACTATTTAGCAAGCTGGAGTCTCGTTCGTTATCGGAATGATCCAGACAAATCG 1968 Query 194 CTCCACCAACTAAGAACGGCCATGCACCAC---CACCCATAGAATCAAGAAAGAGCTATC 250 |||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||| Sbjct 1967 CTCCACCAACTAAGAACGGCCATGCACCACCACCACCCACAGAATCGAGAAAGAGCTATC 1908 Query 251 AAT 253 ||| Sbjct 1907 AAT 1905 >seq17633 Length=921127 Score = 163 bits (180), Expect = 5e-38 Identities = 96/100 (96%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct 62572 GTCTCGTTCGTTATCGGAATGAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGC 62631 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||| |||||| ||||||||||||||||||||| Sbjct 62632 ACCACCACCCACAGAATCGAGAAAGAGCTATCAATCTGTC 62671 >seq3868 Length=2644 Score = 158 bits (174), Expect = 2e-36 Identities = 105/117 (90%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||||||| || | | |||||||||||||||||||| | |||||||||| |||||||| Sbjct 2161 CTATTTATCAAGCTGGAGTCTCGTTCGTTATCGGAATGATACAGACAAATCGCTCCACCA 2220 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct 2221 ACTAAGAACGGCCATGCACCACCACCCACAGAATCGAGAAAGAGCTATCAATCTGTC 2277 >seq14749 Length=77162 Score = 154 bits (170), Expect = 2e-35 Identities = 159/204 (78%), Gaps = 3/204 (1%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| || Sbjct 1508 CATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCC 1566 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGA 136 | || | | ||||| | || | | |||||||||||||| | ||| | | || Sbjct 1567 ATCTCGCGT-GGCTGAACGCTACTTGTCCCTCTAAGAAGTTGCCGACCGCACGGGGCCGC 1625 Query 137 TGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTC 196 | ||||||| || |||||||||||||| ||||| ||||||||||||| ||| Sbjct 1626 -GTAACTATTTAACAATCCGGAGTCTCGTTCGTTATTGGAATGAACCAGACAAATCGCTC 1684 Query 197 CACCAACTAAGAACGGCCATGCAC 220 |||||||||||||||||||||||| Sbjct 1685 CACCAACTAAGAACGGCCATGCAC 1708 >seq21339 Length=814 Score = 89.7 bits (98), Expect = 8e-16 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 198 ACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 1 ACCAACTAAGAACGGCCATGCACCACCACCCACAGAATTGAGAAAGAGCTATCAATC 57 >seq15505 Length=1356 Score = 87.8 bits (96), Expect = 3e-15 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 198 ACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257 |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| || Sbjct 1 ACCAACTAAGAACGGCCATGCACCACCACCCACAGAATTGAGAAAAAGCTATCAATCCGT 60 Query 258 C 258 | Sbjct 61 C 61 >seq3426 Length=294820 Score = 82.4 bits (90), Expect = 1e-13 Identities = 47/48 (98%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 211 GGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 109319 GGCCATGCACCACCACCCACAGAATCAAGAAAGAGCTATCAATCTGTC 109272 >seq6866 Length=2368 Score = 78.8 bits (86), Expect = 1e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| Sbjct 2300 CATTGTTGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 2245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796138620642