Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq6604 235 9e-60
seq14667 230 4e-58
seq9938 219 7e-55
seq8864 215 8e-54
seq17633 163 5e-38
seq3868 158 2e-36
seq14749 154 2e-35
seq21339 89.7 8e-16
seq15505 87.8 3e-15
seq3426 82.4 1e-13
seq6866 78.8 1e-12
>seq6604
Length=1756
Score = 235 bits (260), Expect = 9e-60
Identities = 201/245 (82%), Gaps = 5/245 (2%)
Strand=Plus/Minus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76
|| ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| ||
Sbjct 829 CATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCC 771
Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGA 136
| ||| | | | ||| | |||| | |||||||||||||| | || ||| | ||
Sbjct 770 ATCTTGCGT-GACTGAACGCCACTTGTCCCTCTAAGAAGTTGAACGCCGACCGCATGGGA 712
Query 137 TGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193
| | |||||||||| | | |||||||||||||||||||| | |||||||||||
Sbjct 711 CCGCGTAACTATTTAGCAAGCTGGAGTCTCGTTCGTTATCGGAATGATCCAGACAAATCG 652
Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct 651 CTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCGAGAAAGAGCTATCAAT 592
Query 254 CTGTC 258
|||||
Sbjct 591 CTGTC 587
>seq14667
Length=1487825
Score = 230 bits (254), Expect = 4e-58
Identities = 200/245 (82%), Gaps = 5/245 (2%)
Strand=Plus/Plus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76
|| ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| ||
Sbjct 357337 CATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCC 357395
Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGA 136
| || | | ||||| | |||| | |||||||||||||| | |||||| | |
Sbjct 357396 ATCTCGCGT-GGCTGAATGCCACTTGTCCCTCTAAGAAGTTGAACGCCAACCGCAAGGGG 357454
Query 137 TGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193
| | ||||||| || | |||||||||||||||||||| |||||||||||||
Sbjct 357455 CCGCGTAACTATTTAACAAGCCGGAGTCTCGTTCGTTATCGGAATGAACCAGACAAATCG 357514
Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct 357515 CTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCGAGAAAGAGCTATCAAT 357574
Query 254 CTGTC 258
|||||
Sbjct 357575 CTGTC 357579
>seq9938
Length=3524
Score = 219 bits (242), Expect = 7e-55
Identities = 199/247 (81%), Gaps = 9/247 (4%)
Strand=Plus/Plus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76
|| ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| ||
Sbjct 2247 CATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCC 2305
Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGA 136
| || | | ||||| | |||| | |||||||||||||| | || ||| | ||
Sbjct 2306 ATCTCGCGT-GGCTGAACGCCACTTGTCCCTCTAAGAAGTTGAACGCCGACCGCA--CGG 2362
Query 137 TGGGGC-----TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191
| || ||||||||| | | ||||||||||||||| |||| | ||||||||||
Sbjct 2363 GGCCGCATAACTATTTAGCAAGCTGGAGTCTCGTTCGTTATCAGAATGATCCAGACAAAT 2422
Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251
| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct 2423 CGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCGAGAAAGAGCTATCA 2482
Query 252 ATCTGTC 258
||| |||
Sbjct 2483 ATCCGTC 2489
>seq8864
Length=2357
Score = 215 bits (238), Expect = 8e-54
Identities = 196/243 (81%), Gaps = 8/243 (3%)
Strand=Plus/Minus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76
|| ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| ||
Sbjct 2145 CATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCC 2087
Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGA 136
| ||| | | ||||| | |||| | |||||||||||||| | || ||| | |
Sbjct 2086 ATCTTGCGT-GGCTGAACGCCACTTGTCCCTCTAAGAAGTTGAACGCCGACCGCACAGGG 2028
Query 137 TGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193
| | |||||||||| | | |||||||||||||||||||| | |||||||||||
Sbjct 2027 CCGCGTAACTATTTAGCAAGCTGGAGTCTCGTTCGTTATCGGAATGATCCAGACAAATCG 1968
Query 194 CTCCACCAACTAAGAACGGCCATGCACCAC---CACCCATAGAATCAAGAAAGAGCTATC 250
|||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||
Sbjct 1967 CTCCACCAACTAAGAACGGCCATGCACCACCACCACCCACAGAATCGAGAAAGAGCTATC 1908
Query 251 AAT 253
|||
Sbjct 1907 AAT 1905
>seq17633
Length=921127
Score = 163 bits (180), Expect = 5e-38
Identities = 96/100 (96%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct 62572 GTCTCGTTCGTTATCGGAATGAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGC 62631
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||| |||||| |||||||||||||||||||||
Sbjct 62632 ACCACCACCCACAGAATCGAGAAAGAGCTATCAATCTGTC 62671
>seq3868
Length=2644
Score = 158 bits (174), Expect = 2e-36
Identities = 105/117 (90%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||||||| || | | |||||||||||||||||||| | |||||||||| ||||||||
Sbjct 2161 CTATTTATCAAGCTGGAGTCTCGTTCGTTATCGGAATGATACAGACAAATCGCTCCACCA 2220
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct 2221 ACTAAGAACGGCCATGCACCACCACCCACAGAATCGAGAAAGAGCTATCAATCTGTC 2277
>seq14749
Length=77162
Score = 154 bits (170), Expect = 2e-35
Identities = 159/204 (78%), Gaps = 3/204 (1%)
Strand=Plus/Plus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76
|| ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| ||
Sbjct 1508 CATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCC 1566
Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGA 136
| || | | ||||| | || | | |||||||||||||| | ||| | | ||
Sbjct 1567 ATCTCGCGT-GGCTGAACGCTACTTGTCCCTCTAAGAAGTTGCCGACCGCACGGGGCCGC 1625
Query 137 TGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTC 196
| ||||||| || |||||||||||||| ||||| ||||||||||||| |||
Sbjct 1626 -GTAACTATTTAACAATCCGGAGTCTCGTTCGTTATTGGAATGAACCAGACAAATCGCTC 1684
Query 197 CACCAACTAAGAACGGCCATGCAC 220
||||||||||||||||||||||||
Sbjct 1685 CACCAACTAAGAACGGCCATGCAC 1708
>seq21339
Length=814
Score = 89.7 bits (98), Expect = 8e-16
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 198 ACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 1 ACCAACTAAGAACGGCCATGCACCACCACCCACAGAATTGAGAAAGAGCTATCAATC 57
>seq15505
Length=1356
Score = 87.8 bits (96), Expect = 3e-15
Identities = 56/61 (92%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 198 ACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257
|||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| ||
Sbjct 1 ACCAACTAAGAACGGCCATGCACCACCACCCACAGAATTGAGAAAAAGCTATCAATCCGT 60
Query 258 C 258
|
Sbjct 61 C 61
>seq3426
Length=294820
Score = 82.4 bits (90), Expect = 1e-13
Identities = 47/48 (98%), Gaps = 0/48 (0%)
Strand=Plus/Minus
Query 211 GGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 109319 GGCCATGCACCACCACCCACAGAATCAAGAAAGAGCTATCAATCTGTC 109272
>seq6866
Length=2368
Score = 78.8 bits (86), Expect = 1e-12
Identities = 51/56 (91%), Gaps = 0/56 (0%)
Strand=Plus/Minus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72
|| ||| |||||||||| |||| | |||||||||||||||||||||||||||||||
Sbjct 2300 CATTGTTGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 2245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796138620642
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |