Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq3375 340 3e-91
seq95 284 2e-74
seq4387 273 4e-71
seq14601 242 6e-62
seq7708 185 1e-44
seq13103 145 1e-32
seq20664 116 6e-24
seq3673 73.4 7e-11
>seq3375
Length=89888
Score = 340 bits (376), Expect = 3e-91
Identities = 253/295 (86%), Gaps = 1/295 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | ||||| |||| ||||||| ||||||||||||||||||||||||||||
Sbjct 71738 TACTGAGCAGGATTACTATTGCAACGACGGTACATCAGTAGGGTAAAACTAACCTGTCTC 71797
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 71798 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 71857
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 71858 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGATGTCGCTA 71917
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||| ||||||| ||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 71918 TGAATGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 71977
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294
| ||| | | | |||||||| ||||| | |||||| ||| ||| |||
Sbjct 71978 TAAAACCCAAAAAGCCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCCGTACTCA 72032
>seq95
Length=581042
Score = 284 bits (314), Expect = 2e-74
Identities = 213/250 (85%), Gaps = 0/250 (0%)
Strand=Plus/Plus
Query 45 AAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACA 104
|||||||| ||||||| |||||||||| ||||||||| ||||||||||||||||||||||
Sbjct 63280 AAACTAACATGTCTCACGACGGTCTAACCCCAGCTCATGTTCCCTATTAGTGGGTGAACA 63339
Query 105 ATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAA 164
||||||||||| ||||| |||||| |||||||||||| ||||||||||||||||||
Sbjct 63340 ATCCAACGCTTGGTGAATTGTGCTTCACAATGATAGGAAGACCCGACATCGAAGGATCAA 63399
Query 165 AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 63400 AAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 63459
Query 225 CTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGG 284
||| |||||| || | ||| | | | |||||||| ||||| | |||||| ||
Sbjct 63460 CTGACACCTCCTGCTTAAAACCCAAAAAGCCAGAAGGATCGTGAGGCCCCGCTTTCACGG 63519
Query 285 TTTGTATTCA 294
| ||| |||
Sbjct 63520 TCCGTACTCA 63529
>seq4387
Length=3233148
Score = 273 bits (302), Expect = 4e-71
Identities = 205/241 (85%), Gaps = 0/241 (0%)
Strand=Plus/Minus
Query 54 TGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGC 113
||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 1176329 TGTCTCACGACGGACTAACCCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAATGC 1176270
Query 114 TTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACG 173
|| |||||||||||| |||||| ||||||||||||||||||||||||||||| |||
Sbjct 1176269 TTGGTGAATTCTGCTTCACAATGATACGAAGAGCCGACATCGAAGGATCAAAAAGCGACG 1176210
Query 174 TCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCT 233
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 1176209 TCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCT 1176150
Query 234 CTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| || | ||| | | | |||||||| ||||| | |||||| ||| ||| ||
Sbjct 1176149 CCTGCTTAAAACCCAAAAAGCCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCCGTACTC 1176090
Query 294 A 294
|
Sbjct 1176089 A 1176089
>seq14601
Length=576981
Score = 242 bits (268), Expect = 6e-62
Identities = 154/167 (92%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 41 GGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTG 100
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 452454 GGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTG 452395
Query 101 AACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGA 160
|||||||||| |||| |||||||||||| |||||||||||| ||||||||||||||
Sbjct 452394 AACAATCCAATGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAACCGACATCGAAGGA 452335
Query 161 TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207
||||||||| |||| ||||||||| |||||||||||||||||| |||
Sbjct 452334 TCAAAAAGCGACGTTGCTATGAACACTTGGCTGCCACAAGCCACTTA 452288
>seq7708
Length=2709373
Score = 185 bits (204), Expect = 1e-44
Identities = 134/155 (86%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 71 AACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130
||||||| |||||||||||||||||| |||||||||||||| ||| |||||||||||
Sbjct 2116844 AACCCAGGTCACGTTCCCTATTAGTGAGTGAACAATCCAACACTTGGTGAATTCTGCTTT 2116785
Query 131 GGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGG 190
|| | |||| ||||| |||||| | |||||||||| |||| ||||||||| |||||
Sbjct 2116784 AAAATTAAAGGAGGAGCCAACATCGGACGATCAAAAAGTGACGTTGCTATGAACACTTGG 2116725
Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTC 225
|||||| ||||||||||||||||||||||||||||
Sbjct 2116724 CTGCCAGAAGCCAGTTATCCCTGTGGTAACTTTTC 2116690
>seq13103
Length=1669337
Score = 145 bits (160), Expect = 1e-32
Identities = 152/198 (77%), Gaps = 14/198 (7%)
Strand=Plus/Minus
Query 37 GTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTG 96
||||||||||||||||| ||| |||| || || | || ||||||| ||||
Sbjct 1205299 GTAGGGTAAAACTAACC-----CAT------CTAATCCAAGTTTACATTCCCTACTAGTA 1205251
Query 97 GGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGA 156
|||||||||| || |||| ||| | || |||| |||||||||||| ||| |
Sbjct 1205250 GGTGAACAATTCAGTGCTTGGTGAACATTA--TCACAATGACAGGAAGAGCCGAGATCAA 1205193
Query 157 AGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGG 216
| ||||||||||||| | ||||||||||||||| || |||||||||||||||||| |||
Sbjct 1205192 TGAATCAAAAAGCAACATTGCTATGAACGCTTGGTTGTCACAAGCCAGTTATCCCT-TGG 1205134
Query 217 TAACTTTTCTGGCACCTC 234
|||||||| | ||||||
Sbjct 1205133 TAACTTTTTGGACACCTC 1205116
>seq20664
Length=629704
Score = 116 bits (128), Expect = 6e-24
Identities = 95/116 (82%), Gaps = 7/116 (6%)
Strand=Plus/Plus
Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178
|||||||||||| ||||||||||||||| |||| || | ||||||||| | || ||
Sbjct 405068 GAATTCTGCTTCACAATGATAGGAAGAGCCATCATCAAAAGCTCAAAAAGCGATGTTGCA 405127
Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234
|||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 405128 TTGAACGCTTGGC-------AGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTC 405176
>seq3673
Length=1149972
Score = 73.4 bits (80), Expect = 7e-11
Identities = 42/43 (98%), Gaps = 0/43 (0%)
Strand=Plus/Plus
Query 40 GGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCAC 82
|| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1065767 GGCTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCAC 1065809
Score = 73.4 bits (80), Expect = 7e-11
Identities = 42/43 (98%), Gaps = 0/43 (0%)
Strand=Plus/Plus
Query 40 GGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCAC 82
|| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1074926 GGCTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCAC 1074968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 853667932992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |