Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq3375 340 3e-91 seq95 284 2e-74 seq4387 273 4e-71 seq14601 242 6e-62 seq7708 185 1e-44 seq13103 145 1e-32 seq20664 116 6e-24 seq3673 73.4 7e-11 >seq3375 Length=89888 Score = 340 bits (376), Expect = 3e-91 Identities = 253/295 (86%), Gaps = 1/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| ||||||| |||||||||||||||||||||||||||| Sbjct 71738 TACTGAGCAGGATTACTATTGCAACGACGGTACATCAGTAGGGTAAAACTAACCTGTCTC 71797 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 71798 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 71857 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 71858 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGATGTCGCTA 71917 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||| ||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 71918 TGAATGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 71977 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | ||| | | | |||||||| ||||| | |||||| ||| ||| ||| Sbjct 71978 TAAAACCCAAAAAGCCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCCGTACTCA 72032 >seq95 Length=581042 Score = 284 bits (314), Expect = 2e-74 Identities = 213/250 (85%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 45 AAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACA 104 |||||||| ||||||| |||||||||| ||||||||| |||||||||||||||||||||| Sbjct 63280 AAACTAACATGTCTCACGACGGTCTAACCCCAGCTCATGTTCCCTATTAGTGGGTGAACA 63339 Query 105 ATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAA 164 ||||||||||| ||||| |||||| |||||||||||| |||||||||||||||||| Sbjct 63340 ATCCAACGCTTGGTGAATTGTGCTTCACAATGATAGGAAGACCCGACATCGAAGGATCAA 63399 Query 165 AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 63400 AAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 63459 Query 225 CTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGG 284 ||| |||||| || | ||| | | | |||||||| ||||| | |||||| || Sbjct 63460 CTGACACCTCCTGCTTAAAACCCAAAAAGCCAGAAGGATCGTGAGGCCCCGCTTTCACGG 63519 Query 285 TTTGTATTCA 294 | ||| ||| Sbjct 63520 TCCGTACTCA 63529 >seq4387 Length=3233148 Score = 273 bits (302), Expect = 4e-71 Identities = 205/241 (85%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 54 TGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGC 113 ||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||| || Sbjct 1176329 TGTCTCACGACGGACTAACCCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAATGC 1176270 Query 114 TTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACG 173 || |||||||||||| |||||| ||||||||||||||||||||||||||||| ||| Sbjct 1176269 TTGGTGAATTCTGCTTCACAATGATACGAAGAGCCGACATCGAAGGATCAAAAAGCGACG 1176210 Query 174 TCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCT 233 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct 1176209 TCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCT 1176150 Query 234 CTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | || | ||| | | | |||||||| ||||| | |||||| ||| ||| || Sbjct 1176149 CCTGCTTAAAACCCAAAAAGCCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCCGTACTC 1176090 Query 294 A 294 | Sbjct 1176089 A 1176089 >seq14601 Length=576981 Score = 242 bits (268), Expect = 6e-62 Identities = 154/167 (92%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 41 GGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTG 100 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 452454 GGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTG 452395 Query 101 AACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGA 160 |||||||||| |||| |||||||||||| |||||||||||| |||||||||||||| Sbjct 452394 AACAATCCAATGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAACCGACATCGAAGGA 452335 Query 161 TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207 ||||||||| |||| ||||||||| |||||||||||||||||| ||| Sbjct 452334 TCAAAAAGCGACGTTGCTATGAACACTTGGCTGCCACAAGCCACTTA 452288 >seq7708 Length=2709373 Score = 185 bits (204), Expect = 1e-44 Identities = 134/155 (86%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 71 AACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130 ||||||| |||||||||||||||||| |||||||||||||| ||| ||||||||||| Sbjct 2116844 AACCCAGGTCACGTTCCCTATTAGTGAGTGAACAATCCAACACTTGGTGAATTCTGCTTT 2116785 Query 131 GGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGG 190 || | |||| ||||| |||||| | |||||||||| |||| ||||||||| ||||| Sbjct 2116784 AAAATTAAAGGAGGAGCCAACATCGGACGATCAAAAAGTGACGTTGCTATGAACACTTGG 2116725 Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTC 225 |||||| |||||||||||||||||||||||||||| Sbjct 2116724 CTGCCAGAAGCCAGTTATCCCTGTGGTAACTTTTC 2116690 >seq13103 Length=1669337 Score = 145 bits (160), Expect = 1e-32 Identities = 152/198 (77%), Gaps = 14/198 (7%) Strand=Plus/Minus Query 37 GTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTG 96 ||||||||||||||||| ||| |||| || || | || ||||||| |||| Sbjct 1205299 GTAGGGTAAAACTAACC-----CAT------CTAATCCAAGTTTACATTCCCTACTAGTA 1205251 Query 97 GGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGA 156 |||||||||| || |||| ||| | || |||| |||||||||||| ||| | Sbjct 1205250 GGTGAACAATTCAGTGCTTGGTGAACATTA--TCACAATGACAGGAAGAGCCGAGATCAA 1205193 Query 157 AGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGG 216 | ||||||||||||| | ||||||||||||||| || |||||||||||||||||| ||| Sbjct 1205192 TGAATCAAAAAGCAACATTGCTATGAACGCTTGGTTGTCACAAGCCAGTTATCCCT-TGG 1205134 Query 217 TAACTTTTCTGGCACCTC 234 |||||||| | |||||| Sbjct 1205133 TAACTTTTTGGACACCTC 1205116 >seq20664 Length=629704 Score = 116 bits (128), Expect = 6e-24 Identities = 95/116 (82%), Gaps = 7/116 (6%) Strand=Plus/Plus Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 |||||||||||| ||||||||||||||| |||| || | ||||||||| | || || Sbjct 405068 GAATTCTGCTTCACAATGATAGGAAGAGCCATCATCAAAAGCTCAAAAAGCGATGTTGCA 405127 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 |||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 405128 TTGAACGCTTGGC-------AGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTC 405176 >seq3673 Length=1149972 Score = 73.4 bits (80), Expect = 7e-11 Identities = 42/43 (98%), Gaps = 0/43 (0%) Strand=Plus/Plus Query 40 GGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCAC 82 || |||||||||||||||||||||||||||||||||||||||| Sbjct 1065767 GGCTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCAC 1065809 Score = 73.4 bits (80), Expect = 7e-11 Identities = 42/43 (98%), Gaps = 0/43 (0%) Strand=Plus/Plus Query 40 GGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCAC 82 || |||||||||||||||||||||||||||||||||||||||| Sbjct 1074926 GGCTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCAC 1074968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853667932992